Hyalella azteca: 108672012
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Entry
108672012 CDS
T07535
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
hazt
Hyalella azteca
Pathway
hazt03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hazt00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108672012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hazt03009
]
108672012
03016 Transfer RNA biogenesis [BR:
hazt03016
]
108672012
03029 Mitochondrial biogenesis [BR:
hazt03029
]
108672012
Enzymes [BR:
hazt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
108672012
Ribosome biogenesis [BR:
hazt03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
108672012
Transfer RNA biogenesis [BR:
hazt03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
108672012
Mitochondrial biogenesis [BR:
hazt03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
108672012
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POP1_N
POP1_C
POPLD
Motif
Other DBs
NCBI-GeneID:
108672012
NCBI-ProteinID:
XP_018015115
UniProt:
A0A8B7NN57
LinkDB
All DBs
Position
Unknown
AA seq
1210 aa
AA seq
DB search
MAEPLPASANSSVVLHLAAARIKELHHLQRELEQCKSGKGGRSYQKLPRHMQRRALSSNP
KRLPRRLRRRHLAEGEPPRPSKRPAAKHRPRPRAGEDKLDAPIVSSRVNRVGAARVDRVG
DYERRQSVAGNTWLETHVWHAKRFHMTRRWGYALPLRPTQKMYRPTLRAAAQRCVLQDRS
FMCCVELRGDACVMSALEACVSESVRQQLISVSSGGIVSLTLYKPRMCPRQAVCEVEVQK
LPSLGTDSCDGNSDRNGAADHCNRRDFDHNDVEGGASRLWLWVHPASHEDLLQLLRQIFS
LQPQIHGHCVNQCDEEPGEAMETTNDDHDLCNDRQHSHDKKLKSINNNNIDSNELTSVQD
VIPEGNETQNFLDVDTTSDVVLKSKVKRKHRLLQQRLDRAGAPDYVSADNRVAVTCLRDT
LNRFCLRGPETYRVLKTVLLPSTVVPQHTKLVPNNPTHDSQSVEEKSLHKARSSDEDTAD
ETSGSGNLSQESQYDEKSMNKSRSLNDTTVDEANFFNGGTRTSEESAEDSSSWWTSFFGR
MGRAEAHAGNAALWGTAPRVTEDLVLPLVVRDPRVVLPRARVKMSETSAEPPSPSWGRDA
VAPLSPLYDPRVRRALLRHRCTDHDINTRRHREAVPGAMLPLDDEEARLPVLLLLRRPQG
DDVSGKSAVDVVIPGGWGSNFWTALVLAGAVATGVDSELHFMREELTLPPSYSLPDLPSG
KRYEEAEALERHEAYFRMPPDKRPNFIKLGVQFPFSFPWSKLVASLRSRDMFHQMHEICS
GFSREVLLQLGLDGGKISTAENEASDEEIVVMRNPRFLSALDYISCCSGSRRRIFRGVDQ
ESEGTVDTLPVDGSESNIRTSSEEALGLSLDELTDMLKLMKQTSQSYLVRVQVTLIGKGA
LEPGALICRPNSQDLVHLKEVLTNALRPSVHVSMGITEPSCRDSNEEKRKKLKEEHARDL
AKLQRLRKAARQRVRRQHEPGSGGLDAAVNQALSALEETQQELVARCAAFKSSMERLWLP
CPEAPLQQTSRLIIGSLTDAAFSRTRGCGVGQGYVVAATLISVAQHRVARWKGVSPDQPD
VANKKRKFDECSRDESSSLSHCSSPGKRRHTETGLDSKLPATVASTSSAISEEKIKLDKS
KQNLLIDDSSNDSSCSSSQENNSEIISNNETFDVDLPLVHERGVPVLVRNINSLQYRFGM
LTVCSHQPPP
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcctctgcctgcctcggccaactcatcggtggtcctgcatttggctgctgca
aggatcaaggaactccaccatctgcagcgggagttagagcaatgcaagtccggcaagggc
ggcagaagttaccagaagctgccccgccacatgcagcgcagggcgctctcctccaacccc
aagcgcctcccccgccgtctgcgccgccgtcatcttgctgaaggagagcctccgcgtccc
tccaagcgacctgctgctaaacacagaccacgaccacgtgcgggtgaggacaaacttgac
gccccaatagtctcctcgcgtgtgaaccgcgtgggcgccgcgcgtgtggaccgcgtgggc
gactacgagcgccgccagagtgtggcgggcaacacgtggctggagacgcacgtgtggcac
gcgaaacgcttccacatgacgcgtcgctggggctacgcgctccccttgcgccccacgcag
aagatgtaccgccccactctgcgggctgctgctcagcgctgcgttcttcaggaccgttcg
ttcatgtgctgcgtggagttgcgtggtgacgcgtgcgtgatgtcagctctggaggcgtgc
gtgtcagagagcgtcaggcagcagctcatctctgtcagcagcggtgggatcgtcagcctc
accctctacaagcctcgcatgtgtccgaggcaggcggtgtgcgaagtggaagtacagaag
ctgccttctctcggcaccgactcttgcgatggcaacagcgacagaaatggcgctgccgat
cactgtaaccgcagggatttcgatcacaacgatgtcgaaggaggcgcctcgaggttatgg
ttgtgggtgcaccccgcttcccacgaggaccttctgcagcttctgcgtcaaatattcagc
ttacagccacagatacacggtcactgtgtaaaccagtgtgatgaagagcctggcgaagcc
atggaaacaacaaacgatgaccacgatttatgcaatgaccgtcaacattctcacgacaaa
aaactaaaatcaattaataacaataatattgacagtaatgaactcacaagcgttcaggac
gtgatacctgaaggtaacgagactcagaattttttggatgtagacacaacatcagacgtt
gttttaaaatcaaaagtgaagcgcaaacaccgactcctacagcagcgtctagaccgagca
ggcgcaccggattacgtgagtgcggacaaccgcgtcgccgtaacgtgtttacgggacact
ctgaaccgcttctgcctacgcgggcctgagacgtacagggttctgaagaccgtcttgttg
ccttctactgtggtgccccagcacacaaaacttgttcctaacaatcccactcatgattct
cagtctgtggaggagaaatctcttcataaagcacgaagttctgatgaagatactgctgat
gaaacgagtggcagtggcaatctctctcaagaatctcaatatgatgagaaatccatgaat
aaatcacgatctttaaatgatactacggtcgatgaagctaattttttcaacggaggtaca
agaactagtgaagaaagcgccgaagattcgagttcgtggtggacgagtttctttggtcgc
atggggcgcgccgaggcgcacgcaggcaacgcggcgctgtggggcacagcgccgcgtgtc
acagaggacctcgtcttgcccctcgtggtgcgcgaccctcgcgtcgtgctgccccgcgca
cgcgtcaagatgtcagagacatccgcagaacctccctcgccctcgtgggggcgggacgct
gtcgcccccctcagccctctctacgacccccgcgtcaggagagccctcctgagacaccgc
tgcactgatcacgacataaacactcgtcggcaccgagaagcagtgccaggagccatgctg
ccgctggatgacgaagaggctcggctgccggtcctgctgctgctgcgacgccctcaggga
gacgacgtctctggaaagagcgccgtggacgtggttattcctggtggttggggcagcaac
ttttggacggcgctggtgctggcaggggccgtggccacgggggttgactcagagcttcac
ttcatgagggaagaactcactctccctccgtcatactcgcttcccgaccttccctcgggg
aagcgttatgaggaggccgaggccctggaaagacatgaggcttatttcagaatgcctccg
gacaagagaccgaatttcattaagttgggcgttcagtttccattttcttttccttggtcc
aaacttgtggcgtcgctgcgaagcagagatatgttccatcaaatgcatgaaatatgctct
gggttttccagggaagttttgttgcagttggggcttgacggtggaaaaatctcaactgca
gaaaatgaggcaagtgacgaagagatcgttgtgatgaggaatcctcgtttcttgtctgct
ttggattatatttcgtgctgcagtggcagcagacgtagaattttccgaggagtagaccag
gaatcagaagggaccgtcgataccttgcctgttgatggatctgaatcaaatatccgaaca
tcgtctgaagaagcccttggattatcattggacgaattaactgacatgctgaagctcatg
aagcaaaccagccaatcgtatctggtgcgcgtgcaagtcaccctcataggcaaaggcgcc
ctagaacccggcgctctaatttgtcgcccaaactcccaagatctcgtacatttgaaggag
gttctcaccaacgccctacgtcctagtgtgcacgtgtctatgggcatcacagagccgagc
tgccgtgactccaatgaggagaagaggaagaaattaaaagaggaacacgccagggatctg
gcgaagctgcagaggctgcgcaaggcagctcggcagcgcgtgcgacggcagcacgagcct
ggcagcggcggcctcgacgcagccgtcaaccaagcgctgagtgctcttgaagaaacccaa
caggagctggtggcgcgctgtgctgcattcaagtcctccatggagcggctgtggctgccg
tgtcccgaggcgccgctgcagcagacctcacgcctcatcataggcagcttgactgacgcc
gcattcagccgcacgcgaggctgtggcgtgggccagggttacgttgtggcagctacactt
atctccgtggcacagcatcgtgtggcgagatggaagggggtatctccggatcagcccgat
gtggccaacaagaaacggaaattcgacgaatgctcgcgagatgaaagttcgtcattgtcc
cactgttcttctcctggcaagcgcaggcacactgaaactgggcttgactccaaacttcct
gcaacagtagcctcaacttcatcagccatttccgaggaaaaaatcaaactggataagtca
aagcagaatcttctaatagatgattcttcaaatgacagcagttgttcgagtagccaagag
aacaactctgaaattatttctaacaacgaaacctttgacgttgacctcccacttgtgcac
gagcgtggcgtgcctgtgctcgtgagaaacattaattccctacagtacaggttcgggatg
ctcaccgtctgtagtcatcagcctccgccttga
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integrated database retrieval system
