Hyalella azteca: 108672265
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Entry
108672265 CDS
T07535
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
hazt
Hyalella azteca
Pathway
hazt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hazt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108672265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hazt03021
]
108672265
03019 Messenger RNA biogenesis [BR:
hazt03019
]
108672265
Transcription machinery [BR:
hazt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
108672265
Messenger RNA biogenesis [BR:
hazt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
108672265
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCHC
zf-CCCH_3
zf-CCCH_2
zf-CCCH_RBM22
zf-CCCH_4
zf-CCCH_12
zf-CCCH_9
zf-C2H2_10
PHD_4
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
108672265
NCBI-ProteinID:
XP_018015399
UniProt:
A0A8B7NNW4
LinkDB
All DBs
Position
Unknown
AA seq
266 aa
AA seq
DB search
MEVIIANVDDVIFDIERQLEEQTGAQLLPFPGMDKSTYSVCSFHTRGACAKGASCPFRHV
RGDRTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHISPDSR
MKDCPWYDRGFCRLGPLCRNRHVRRVLCMNYFAGFCPEGPECKHMHPRFELPKPQEDKNT
TQRSSSALTCNFCGETGHRASHCFKANPQLKESYNMNSALRNRNYLSSYSQRVEKIVCYK
CGQQGHFANRCSKGDFAFLNAAPPNS
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atggaagtaattattgcaaatgttgatgatgtcatttttgacattgaaagacaacttgag
gaacaaacaggtgctcagctgctaccttttcctggcatggataagtcaacatactcagta
tgttcatttcacactagaggagcttgtgctaaaggagcgtcatgcccattccgtcatgta
agaggtgaccgcacagttgtgtgcaagcactggctgcggggtctctgcaagaaaggagat
cagtgtgaattcttgcatgaatatgacatgaccaagatgcccgagtgttacttctactca
cgcttcaatgcgtgccacaacaaggaatgcccgttcttgcatatcagtcctgattcccgc
atgaaagattgcccatggtatgatagaggcttctgtcgtcttggtcctctatgtcgcaac
cgccatgttagacgagttctctgcatgaactactttgctggtttctgtccagaaggaccc
gaatgcaaacatatgcatccccgctttgagttgccaaagccacaagaagacaagaacacc
acgcagcgcagcagctctgctctcacttgcaacttctgtggcgagacgggccatcgagct
agccattgtttcaaggcaaatcctcagctcaaagagtcctacaacatgaacagcgccctt
cgcaatcgtaattatctgagctcatactcgcagagagtggagaagatagtctgctacaag
tgcggtcaacaaggtcactttgccaaccgctgctcaaagggagacttcgcattcctgaac
gcagctccccccaactcctga
DBGET
integrated database retrieval system
