Hyalella azteca: 108672480
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Entry
108672480 CDS
T07535
Name
(RefSeq) LOW QUALITY PROTEIN: regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
hazt
Hyalella azteca
Pathway
hazt03013
Nucleocytoplasmic transport
hazt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hazt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108672480
03015 mRNA surveillance pathway
108672480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hazt03019
]
108672480
Messenger RNA biogenesis [BR:
hazt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
108672480
mRNA cycle factors
P-body specific factors
108672480
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
DpnII-MboI
Motif
Other DBs
NCBI-GeneID:
108672480
NCBI-ProteinID:
XP_047739182
UniProt:
A0A979FRZ5
LinkDB
All DBs
Position
Unknown
AA seq
1222 aa
AA seq
DB search
MCVENISKTSSDDVSMSTTAEKMKDVAQETSPALNDDDGLSTDRETNVATEKTTTNTDKE
NYDLDDNYHVQNLLLNVDEGKAADVADEDVTDPTPDRDKTICTDDATNSLIHVTDPTSDL
DSNIYNNETTNSVKEDEEVAVPSSIIDSSIDKEDGTDTIRDISSPDDIDPNIVNNETTIT
TNKDKVSEHKSDLDLIVVNEATKTASEDFTDPSTVLDESIANDEETNTMNEEDATVREED
ESIITTYEDISVPSPDANAGGDSNAAYGVIDQLILETVRPMEISCVDEVTETVKDRLEVE
GTDANAAELEEDRAFLRCYIAEAATRLQEKAELRATNSAAAKERSELPTGKLDSSLKKNT
AFIKKLRNFTESQYQSLSKEALSLNLSRYIGEAANALLECRLKMTDVHACVLLCSALHQR
YAEFSPALLSGFSKVLKEKPNEKVSNLSKLRVDLRFFAELTAVAVFSQKEGLPLLEGAME
EEVPRSNFLSTDRQKNVRQLMRDYYMSLSQHVVLQYKLIQREERHNRRLLETRGEVEEAR
MAAVATEVAVLEKLQQHAAAMADYLQEQLPQLPQLPKDGRDEEEGGLVLDEGGTIGSAAA
VNVGHVWEDEDDKAFYTSLPELKALLPSILYAESEKTQPPSDESHKDAEKLGDEDELLDT
EEEEVVDASEAAEKEEEEEKNENENDEKGGTISNKAASQRLLFQDFLNTLPKCINRELID
NLALEFCLQFNTKPLRRKLARALFLVPRHRQDLLPFYGRLVAALKPLMPDLAHDLIERLK
MDFRYQLRKKDQINLDSKLKVCRFIGELLKFGILPASDGLQCLRVLLADFKYHHVDMVCA
LLETAGRYLFRTPATHHRTKVLLEQMMRKKTALSFEPRYDTMITNAYYYVNPPERSQLAA
VAPLPPMQQYIKHLIIERLNKSSVEKVLRLLRKLDWKDRETADYCLRRLSSPWEVKFLNI
RCLANLVSGLVLYHDWIAPAVVDNVMEDIRIGLESNRPSLNQHRIASAKYLAELYNYKVI
ESAIIFKVLYCLISFGAGVSSEELQQELDPPEQLLRLRLVVTILDTCGAFFSSGHSKRKL
DCFITYFQYYYHYKRLLWYASDSFPAEYDQVVRECLSALRPSLVLFDSFEQAAEALTVLN
QQLVSKALMQAPELREFFPDQGDSSGLPTIAEHADDVDDDDDEDDRDRGYEDEERDDGAG
ATLSDGDEEDESQRTQVGIFQP
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtagagaatatttctaagacttcaagcgatgatgtttcgatgagcactacagca
gagaagatgaaggatgttgctcaagaaacatccccagccttgaatgatgacgatggtctc
agtacagatcgtgaaacgaatgttgctactgaaaagacgaccactaataccgataaagaa
aattatgatttggacgataattatcacgtacaaaaccttcttcttaatgttgatgaaggt
aaggccgccgatgttgctgacgaagatgttactgatcctacgcctgatagagataagacg
atttgtacagacgatgctacgaattccctaatacatgttactgatcccacatctgatcta
gattcaaatatttataataatgagacgacaaatagcgtaaaagaagatgaagaagttgct
gttccatcgtcaattatagattcaagtattgataaagaggatgggacggataccataaga
gatatttcctcacctgatgatatagatcccaatattgttaataatgagacaactattacc
acaaacaaagataaggtttctgagcacaaatctgacctagatctgattgttgttaatgag
gcaacgaagacagcaagcgaagattttaccgatccctccacagttctagatgagagtatt
gccaatgatgaggaaacaaatactatgaacgaagaagacgctacggtaagagaagaagat
gaatcaattattacaacatacgaagatattagcgttccctcaccagatgcaaatgctggc
ggtgactctaatgcagcttatggagtaattgatcagttaattctcgagactgtcaggcca
atggagatctcgtgtgttgacgaagtaaccgaaactgtaaaagatcgtctggaagtggaa
ggaactgatgccaatgcagctgaactggaagaagatcgggcgtttttgcggtgctacatc
gcggaggcggcaacgcgtctgcaggagaaggcagaacttcgcgccacaaactccgctgct
gctaaggagcgctctgagctaccaaccggcaagcttgactccagtctcaagaaaaacacc
gcattcatcaagaaacttcgtaacttcaccgagtctcagtaccagagcctgagcaaggaa
gctctctcactgaacttgtcccgctatatcggcgaggcggcgaacgcgttactcgagtgc
cgacttaagatgactgatgtgcacgcgtgtgtgctgctgtgttctgcgctgcaccagcga
tacgctgaattctcaccggctctcttatctggcttctctaaagttctgaaagaaaagcct
aatgagaaggtgagcaacctgagcaagctgcgcgtggacctccgcttcttcgctgagctc
accgccgtcgccgtgttctcgcagaaggagggcctgccgctgctagaaggtgcaatggaa
gaggaggtcccgcgcagcaacttcctctctaccgaccgacagaagaacgtgcggcagctc
atgcgtgactactacatgtcgctctcccagcacgtcgtactccagtataagttgatccag
cgcgaggagcgccacaacagacggctgctggagacgcgtggcgaggtggaggaggcgcgt
atggcggcggtggccacggaggtggcggtgctggagaagctgcagcagcatgccgccgca
atggccgactatcttcaggagcagctcccacaactaccacaacttcctaaagatggtcgg
gatgaggaagaaggcgggcttgtgctggacgagggcggcacaataggcagcgcggcagct
gtaaacgtcggccacgtctgggaggatgaagatgacaaggccttctacaccagcctgcct
gagcttaaggccctcctgccatccattctctatgcagagtcggagaaaacacagccgcca
agcgatgagagccataaagacgctgagaagcttggcgacgaggatgaactcttggatact
gaagaagaagaagtggttgatgccagcgaagctgctgagaaagaagaagaagaggagaaa
aatgaaaatgaaaacgacgagaaaggtgggacaatttcgaacaaggcggcctcccagaga
ttgctcttccaagacttcctgaacaccttgcccaagtgtatcaacagagagcttattgat
aacctcgctttagaattttgccttcagttcaacacgaaacctctaaggagaaaactggcc
agggctttgtttctggtaccgcgtcaccgtcaggatttgctgccgttctacggccgtctt
gtggccgcccttaagccgctcatgccggacctggcccacgatctcatagagagactcaag
atggacttcagataccagctcaggaaaaaggaccaaatcaacttggatagcaagctgaag
gtgtgtcgctttattggcgagctgctgaagttcggcatcctcccggcgtctgatggcctg
cagtgtctgcgtgtgctgctggcagacttcaagtatcatcatgtcgacatggtctgtgcg
ctactggaaaccgccggtcgctacctctttagaactcctgccacgcaccaccgcaccaaa
gttctgctcgaacagatgatgcggaaaaagactgcactctcatttgagcctcgatacgat
acgatgatcaccaacgcgtattactacgtgaacccgccggagcgcagtcaactggcggcg
gtggcgcccctgccgcccatgcagcagtacattaagcacctcatcatcgagcgtctcaac
aagtcctcggttgagaaagttcttcgactgttaaggaagctggactggaaggaccgcgag
acagcggactattgcctgcgccgcctctcttctccctgggaagtcaagttcctgaacata
cgctgcctcgctaacctcgtcagcggcctcgtcctatatcacgactggatagctcctgcg
gtcgtagacaacgtgatggaggacatcagaattggtcttgaaagcaacaggcctagtctc
aaccagcacagaattgcttcagccaaatacctcgctgaactttacaactataaggtcatc
gaaagtgccatcatcttcaaggtcctctactgcctgatcagtttcggcgcgggtgttagc
agcgaggagctgcagcaggagcttgatcctccagagcagctactgcgcctgcgcctcgtg
gttaccatcctggacacgtgcggggccttcttcagctcaggacacagcaagagaaaactc
gactgctttattacctatttccagtattattaccactacaagaggttgctgtggtatgcc
agcgacagcttcccggcggagtacgaccaggttgtgcgcgagtgtctatccgccctgcgt
ccatctctcgtacttttcgacagcttcgagcaagcggccgaggcgctcactgttcttaac
cagcagcttgtgagcaaagctctcatgcaagcgcctgagcttcgtgagttcttccctgac
caaggagacagctcaggactccccaccatcgctgagcatgcagatgatgtggacgacgat
gatgacgaagatgatcgggatcgtggctacgaagacgaagaacgcgacgacggcgcgggt
gccacgctcagtgacggcgacgaggaagacgagtctcaacgaacacaggtaggaattttc
cagccctaa
DBGET
integrated database retrieval system
