Hyalella azteca: 108673115
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Entry
108673115 CDS
T07535
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
hazt
Hyalella azteca
Pathway
hazt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hazt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108673115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hazt03041
]
108673115
03009 Ribosome biogenesis [BR:
hazt03009
]
108673115
Enzymes [BR:
hazt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108673115
Spliceosome [BR:
hazt03041
]
Complex A
U1 snRNP components
U1 related factors
108673115
Complex B
108673115
Ribosome biogenesis [BR:
hazt03009
]
Eukaryotic type
Pre-60S particles
Helicases
108673115
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
108673115
NCBI-ProteinID:
XP_018016385
UniProt:
A0A8B7NRS2
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MSSFMSIGSNISSNLRYLGAFNCHVPSVLPRWPHQHRNVLRSCGSSQYIFSQKLHTSSRR
LYQDKYDLTEDEDDDEYRQRSRRGPMRGRYGGGQSWNNRRQNFDNSSFRPRHNQKFSDSF
SEDTKPINLEDLPPLKKDFLNLNPELMDQPKEHHQDFLRQHKIIISGQDIPPPIQKFQDH
EFPEGIMKSLAQFDAPTPIQAQGWSIALKGLDMVGIGQTGSGKTLGYLLPGLLHVSHHQQ
LYAQHQKLQRDAPIGLVLAPTRELVQQILAVASEFGPKVHVESVAMFGGASRDVQLGTFY
KRSAKLVVATPGRLIDFLESGQLRLGQCSFVVLDEADRMLDMGFEPQISSIMQHTRSDRQ
TLMWSATWPSEVQQLASSFLSDAVQLTVGSTELKANPDIVQHVHVVEFLEKTALLKKLLR
EGLTQNPEGKALVFAQSQRDVGKIVQRLRDGSFQCGFIHGGLDQLAPPDIPDLSCVINHD
MPDTVATYVHRVGRTGRCGRPGVAHTFFSQRNISKSVALVHLLQEAGQRVDPKLLYMAAK
RRFTPYGDSEVFLPFVPEKTGVFLPFVPEKTGVFLPLSLIHI
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccttcatgtccattggaagtaacatttcttctaatttacgttacttaggagct
ttcaactgccacgtgccatcagtcctaccaagatggcctcaccaacacagaaacgtgttg
cgcagctgtgggtcgtcacaatacattttctcacagaagcttcacacctcatccaggagg
ctatatcaggataaatacgacctaacagaagatgaagatgatgatgaatatagacagagg
agtcggaggggaccaatgagggggaggtatgggggtggccaaagctggaacaacagaaga
caaaattttgacaattcatcttttcggcctcgtcataatcaaaaattttcggatagtttc
tctgaagacactaaacccatcaatcttgaggatctgccacctcttaaaaaagatttcctc
aatctcaatcctgaattgatggatcaacctaaagaacaccaccaggacttcttgcgtcaa
cataaaatcataattagtggacaagacataccgcctccaattcaaaaatttcaagatcat
gagtttcctgagggaattatgaagagtttagcccaatttgatgccccaactcccattcaa
gctcaaggatggagcatagcactcaaaggcctggacatggttggaataggacaaacgggc
tccgggaagacactggggtacctgctgccaggcctcctgcatgtttcccaccaccagcaa
ctctacgcccaacaccagaaactgcaacgtgatgctccaataggacttgttcttgctcct
acaagagagttggtgcagcaaatcttagcagttgcttctgagtttggtcctaaagttcat
gttgagtccgtggcaatgtttggaggagcctccagagatgtccaacttggcaccttttac
aagagatctgctaagctagtggtggcgacccctgggcggctcattgacttcctggagagc
ggacagctgcgtcttggccagtgcagcttcgtggtgctggacgaggctgaccgcatgctg
gacatgggctttgagccgcagatcagcagcatcatgcagcacaccaggagtgaccgccag
acgctgatgtggtccgccacgtggccctctgaggtccagcagctcgcgtccagcttcttg
tcggacgccgtgcagctcaccgtcgggtccacggagctcaaggcaaaccccgacatcgta
caacacgtccacgtcgtggagttccttgagaaaactgctttgctgaagaagttgctgcgg
gaggggctcacccagaaccccgaaggcaaggcgctggtgtttgcgcagagtcagcgcgat
gtgggcaagattgtgcagcgactgagggacggcagtttccagtgcggcttcatacacggc
ggcctcgatcagctggcncccccagacatcccggacctgagctgcgtgatcaaccacgac
atgccggacacggtggcgacgtacgtccaccgcgtggggcggacgggtcggtgcgggcgc
cctggcgtcgcccacacgttcttctcgcagcgcaacatcagcaagtcggtggctcttgtg
cacctcctgcaggaggcgggacagagggtcgacccaaagctcctctacatggcagccaag
cggcgcttcacgccctatggggacagtgaagtgttcctgccctttgtgcctgagaaaaca
ggtgtgttcctgccctttgtgcctgagaaaacaggtgtgttcctgcccctgtctcttata
cacatctag
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