Hyalella azteca: 108673141
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Entry
108673141 CDS
T07535
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 3B subunit 3-like
KO
K12830
splicing factor 3B subunit 3
Organism
hazt
Hyalella azteca
Pathway
hazt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hazt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108673141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hazt03021
]
108673141
03041 Spliceosome [BR:
hazt03041
]
108673141
03036 Chromosome and associated proteins [BR:
hazt03036
]
108673141
Transcription machinery [BR:
hazt03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
108673141
Spliceosome [BR:
hazt03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
108673141
Complex B
108673141
Complex C
U2 SnRNP specific factors
108673141
Chromosome and associated proteins [BR:
hazt03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
108673141
TFTC complex
108673141
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
108673141
NCBI-ProteinID:
XP_018016414
UniProt:
A0A8B7NRP4
LinkDB
All DBs
Position
Unknown
AA seq
1166 aa
AA seq
DB search
MFLYNLTLQRASGITHAVHGNFSGSRSQELVVSRGRSLELLRPDPNTGKVNLXYFRQHFG
YYLNLISLSDYIVVGSDSGRISILEYNAAKNQFDRIHLETFGKSGCRRIVPGQYLAIDPK
GRAVMIGAVEKQKLVYILNRDGQARLTISSPLEAHKSNTLVYHVVGVDVGFENPLFACLE
IDYEESDTDPSGEAVHRTQQTLTFYELDLGLNHVVRKYHEPLEEHANFLIAVPGGNDGPS
GVLVCSENYITYKNLGDQPDIRCPIPRRRNDLDDPERGMIFICSATHKTRTMFFFLAQTE
QGDIFKIAHLGDDDDEPEFSSIMPLEEGDTFFYGPRALLNLVLVDELDSLSPIMAAQIAD
LANEDSVQVYAACGRGARSSLRVLRHGLEVAEMAVSELPGNPTAVWTVKRRAEDQYDAYI
IVSFPNATLVLSIGETVEEVTDSGFLGTTPTLACSQLGEDALVQIYPDGIRHIRADRRVN
EWKAPGKKTIVRCAVNHRQVVIALTGGEIVYFEMDPSGQLNEYTERKEMKSDVICMGVGR
VAAGEQRCRFLAVGLADTTVRIISLDPNDCLTVLGMQALPALAESLSILEMGGGDVGAEG
ETLQPQHSTLYLNIGLQNGALLRTVLDSVTGDMSDTRSRYLGPKPVKLFRISMQGSEAVL
AMLSRSWLSYYYQNRFHLTPLSYESLAYASGFSSEQCPEGIVAISENTLRILALEKLGAA
FNQVSHPLEYTPRKFVIHPESSHLAIIETDHNCYTEETKRQRKLQMAEELREAAGEEEAE
VAEKMAEALLSEQLPDSVFGSPKAGPGMWASLLRVMEPIQGTTLHLQRFEQNEAAFSINI
VKFINHSDPDQPFLLVGTAKDYILSPRHVDRGYIYVYRFVKEGSGLELVHRTEVEDVPTA
ICPFGGRVLIGVGKLLRIYDLGKKKLLRKCENKHIPNLIVDIKSRGERVIVSDVQESVFY
LRYKRHENQLIIFMDDTNQRCITTSILLDHDTIACADKFGNIAVIRIGSDVSDNVDEDPT
GNKALWDRGLLNGASQKADVVANFHVGETVNTLEKATLIPGGSESLVYTTLSGTIGVLVP
FTSREDHELFMNLEMHMRSEHPPLCGRDHLSFRSYFFPVKNVIDGDLCEQFNLVESTKQR
SISDDLDKTPSELSKTLEDIRTKYAF
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgttcttgtataatttaactcttcagcgtgcctctggcatcacgcatgccgtgcatggc
aacttctcggggtcacgcagccaagagctggttgtgtcccggggccgttctctggagctc
ctcaggccagaccccaacactggcaaggtgaatttatgatattttcgacaacattttggt
tattatttaaatttgatttccctttcagactacattgtggttggatcggactcaggccgt
atttctatccttgaatacaatgctgccaagaaccagttcgaccgaatacacttggaaact
ttcggcaagagtggctgccgccgcattgtgccgggccaataccttgctattgaccccaag
gggcgagctgtcatgataggtgctgtggagaagcaaaagcttgtgtacatcctaaacaga
gacggacaagcacgtctgaccatctcatcgcccctggaggcgcacaagagcaacactctc
gtgtatcacgtcgtgggtgtcgacgtgggcttcgagaacccactctttgcctgtctggaa
atagattatgaggagtcggacacagaccccagtggggaggcagtacaccgcacgcagcag
accctcaccttctatgagctagacctcgggctgaaccacgtcgtccgcaagtaccacgag
cctctcgaggagcacgcaaacttccttatcgccgtgcccggcggcaacgacggaccatca
ggcgtgcttgtttgttctgagaactacatcacttataagaacctgggggaccagcctgac
atccgctgccccatcccacgcaggaggaacgatttggacgacccagagcgcggcatgatc
ttcatctgctcggccactcacaagacgcgcaccatgttcttcttcctggcacagaccgag
cagggcgatatctttaagatcgcacaccttggagacgatgacgacgagccggagttcagc
tccatcatgcccctggaggagggcgacactttcttctacggcccccgcgcgctgctcaat
ctcgtgctcgtagacgagctcgactccctctcacccatcatggctgctcagatcgccgat
ttggcgaacgaggacagcgtgcaggtttacgcagcctgcgggcgcggtgcacgcagcagc
ctgcgcgtcctgcggcacggtctggaggtcgcagagatggccgtgtctgagctgccgggc
aaccctacggccgtgtggaccgttaagcgcagggctgaagaccaatacgacgcctacatc
atcgtatcgttccccaacgctacgctggtgctcagtattggcgagaccgtcgaggaggtc
acagactcgggcttcctgggcaccacaccgacgctcgcctgctcccagctcggcgaggac
gcccttgtgcagatttacccggacggtatccggcacatcagagcggaccggcgggtgaac
gaatggaaggcgccgggcaagaagacgatcgtgcgatgcgctgtcaaccaccggcaggtc
gtcatcgccctcactgggggcgagatcgtctactttgagatggatcctagcgggcagctg
aacgagtacacggagcgcaaggagatgaagagtgacgtgatctgcatgggcgtgggacgc
gtggcggcgggggaacagcgctgtcgcttcctggccgtcggtctggcggacaccaccgtc
aggataatctccctggaccctaacgactgcctgacagtgctgggcatgcaggcgctacct
gcgctcgctgagagcctcagtatcctggagatgggaggcggtgacgtgggcgctgagggg
gagacgctccagccccagcactcgacgctctacctcaacattggcctccagaacggagcg
ctactgcgcacagtgctggactcggtgacgggcgacatgtcggacacgcggtcccgctac
ctcggccccaagcccgtcaagctcttcaggatctccatgcagggatctgaggccgtgctg
gccatgttgtcgcgctcctggctctcctactactaccagaaccgcttccacttgacgccc
ctgagctacgagagcctcgcctacgcctcaggcttctcatcagaacaatgtcctgagggc
atcgtcgccatcagcgaaaacacgctgcgtattctcgccctcgagaagctgggcgctgca
ttcaatcaggtgtctcaccctctcgagtacacaccccgcaagttcgtcattcatccagag
agcagccacctcgccatcattgagacggaccacaactgctacacggaggaaaccaaacgg
cagaggaagctgcagatggctgaggagcttcgtgaggcagcgggggaggaagaggcagag
gtggcggagaagatggcggaggctctgctgtcggagcagctgccggactctgtgtttggg
tcgcccaaggcaggacccggcatgtgggcctccctgctgcgggtcatggagcccatccag
ggcaccacgctgcacctgcagcgatttgagcagaacgaagccgccttcagcatcaacatc
gtgaaattcatcaatcacagcgaccctgaccagccgttccttctcgtcggcaccgccaag
gactacatcctgtcaccacggcacgtcgacagaggttacatctacgtctacaggttcgtg
aaggaaggcagcgggctggagttggtgcacagaacggaggtcgaggacgtgcccaccgca
atctgccccttcgggggacgagtgctcatcggtgttggcaagctcctcaggatatacgac
ctgggcaagaaaaaactcctcaggaagtgcgagaataaacacattccaaatctgatcgtg
gatatcaagagtcgcggagaacgcgtgatcgtgtcagacgtgcaggagtccgtgttttat
ttacgctacaagcgccacgagaaccagctcatcatcttcatggatgacacaaaccaacgc
tgcatcaccacatcaattctactcgatcacgacaccattgcctgcgctgacaaatttggc
aacattgcagtgatccgtattggaagtgacgtgtccgacaacgttgatgaagaccccacg
ggtaataaagcgctgtgggaccgaggtctgctcaatggtgcttctcaaaaggctgacgtt
gtggcaaatttccacgtgggagagacagtgaacacgttggagaaagcaacactcatccca
ggcggcagcgagagtctcgtctacacaactttgagtggcacaatcggcgtcttggtgcct
ttcacctcccgcgaggaccacgagctcttcatgaaccttgaaatgcacatgcgttctgag
cacccaccgctttgtggcagagatcatctttccttcagatcttactttttcccagtcaaa
aatgttattgacggcgatctgtgcgagcagttcaacctggtagaatctaccaagcagcga
agcatttctgatgatctcgacaaaactccaagcgagctttccaaaactcttgaagacatc
aggacaaaatatgctttctaa
DBGET
integrated database retrieval system
