KEGG   Hyalella azteca: 108673250
Entry
108673250         CDS       T07535                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
hazt  Hyalella azteca
Pathway
hazt03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hazt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108673250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hazt03041]
    108673250
Spliceosome [BR:hazt03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    108673250
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 EIF3I WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_RIG_2nd WDR90_beta-prop_4th NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_EIPR1 PRP4 Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_Vps41 Ge1_WD40 Beta-prop_WDR19_1st Beta-prop_SCAP RMC1_N Nbas_N Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_SPT8 WD_LRWD1 Beta-prop_DCAF12 MIOS_WD40 WDR54 Beta-prop_WDR11_1st Tho2
Other DBs
NCBI-GeneID: 108673250
NCBI-ProteinID: XP_018016537
UniProt: A0A8B7NS45
LinkDB
Position
Unknown
AA seq 519 aa
MSGGKDSPMVIDSDGSDSYESEDDYSPPGSPRSRTDTPPPPPPGTTSDGSPGQDNIVDGA
QDYVDVDESPVVVDEKAALLEEFERKRRARQMHVPTEDSEVGAVLRQHGAPFCLFGEGPA
ERRDRLKDLLSRLTTDQQQQQQQQQHVTKQELPSVRRKEETWYHEGPKRLKEVRQNLLQY
SIPRARDRLEKERALNADPTLITAQKQETSARLRRYQLLISQNADIRPVSCVRFSPDGRQ
LATASWSGNVQVWDVSDDGRDGSRSLRGHEGHVDSLAWHPQARISQSPAQLNLASCGRDG
SVLLWGLESESCIASLPSVGARATEVAFHPCGTLLAVTVDDASWRLWDVEAGEEVLFQEG
HSKGVCSISFQKDGALAATGGMDNFGRVWDLRTGRCVMFMAGHQGAILSVDWSPDCYHLA
SGSADNSVRIWDVRQRVSILTLPAHTKLVSAVRYEPCNGSYLATCSYDGMVRLWPHKVCQ
PLRTLQGHGHKIMSVDISPDGTSIATGAFDKTYKIWGPD
NT seq 1560 nt   +upstreamnt  +downstreamnt
atgtctggaggtaaagattctcccatggtgatagactcagatgggtctgacagttatgaa
tcagaagatgattattctcctcctggatcaccaaggtcaagaacagacactccaccccct
ccaccaccaggcaccacatctgatggatcccctggacaagacaacatagttgatggtgct
caggactatgttgatgtggatgagagtcctgtagttgtggatgagaaggctgccttgctg
gaggagtttgagaggaagagaagggccagacaaatgcatgtgcctactgaggattcagag
gtcggagctgtgctgcgccagcatggtgctccgttctgtctgtttggtgaaggtccggct
gaacgcagggatcgtcttaaagacctcttgtcccgcctcactactgaccagcagcaacaa
caacaacagcagcagcatgtcacaaagcaggagctgccttccgttcgtcgcaaagaagaa
acttggtatcatgaaggacccaagagactgaaagaagtgcgtcagaatttattacagtat
tcaatacctcgggcacgtgatagacttgagaaagaaagagccctcaatgccgaccctact
ctcatcacagcccaaaaacaggaaacgtcagcacggttacgtcgctaccagcttcttatc
agccagaatgccgacattcgccctgtgagctgcgtcaggtttagtcctgacggtcggcag
ctggcaaccgcaagctggtctggcaatgtgcaggtatgggacgtatcagacgatggtcgt
gacggcagccgctctctccgcggccacgaaggtcacgtggacagcctagcgtggcacccc
caagcccgcatctcacagtctcctgcccagttgaacctcgcgtcgtgtgggcgcgacgga
tccgtgctgctctgggggctggagtccgagtcgtgcatcgctagcctccccagcgtgggc
gccagggctactgaagtcgccttccatccctgcggcacacttctggcggtcaccgtggat
gatgccagctggagactctgggacgttgaagcgggggaagaggtgctgttccaagaaggg
cacagcaagggcgtgtgttcgatcagtttccagaaagacggcgcactggccgctacgggc
ggcatggacaacttcggtcgtgtatgggatttgcgtaccggccgctgcgtgatgttcatg
gctgggcatcaaggtgccatcttgtccgtggactggtctcctgattgctaccatctggcg
tctggcagcgcggataattctgttcgcatttgggatgtacgacaacgtgtctcgattctc
acgttgccagcgcacacaaagcttgtgtctgcagtgcgatacgagccgtgcaacgggtca
tacctcgcaacgtgtagttacgatggcatggtacgcttgtggcctcataaagtctgccag
cccctcaggaccctgcaggggcacggccataaaatcatgagtgtcgatatcagccctgat
ggcacctcaattgccaccggcgccttcgataagacttataaaatttggggacctgattaa

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