Hyalella azteca: 108673957
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Entry
108673957 CDS
T07535
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
hazt
Hyalella azteca
Brite
KEGG Orthology (KO) [BR:
hazt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hazt03041
]
108673957
Spliceosome [BR:
hazt03041
]
Common components
Common spliceosomal components
General mRNP proteins
108673957
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
RBD_DEAH11
RRM_8
Motif
Other DBs
NCBI-GeneID:
108673957
NCBI-ProteinID:
XP_018017337
UniProt:
A0A8B7NUD7
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MKDEMADELDVDAMLEAPYKKDDDSATGNADSDSKQNGHSKSSSRRDRDSSKDRDKDRSK
RRSRSRDRHTSRRGHRSKSRDRRSKSRDRKRSRSRDRRSKDRDTSRRSKDRLDRPRDRSR
RSSRDRSRRSRDRKRSVSKSRDRRRSKSRDRKKSRSKSKDRRKSRGTRSRSRDRRRRNRS
GSRRRSRNRSTSHEIHIETKRQLTAEERDARTVFCMQLSARIKARELEEFFSVVGKVTDV
RIITDAKTRRSKGIAYVEFEDVESVPLALGLAGQKLLGVPIVVQPTLAERNRAANMNNPD
HGTKPGSGPMRLYVGSLHFNITEEMLRGIFEPFGKIDVIQLIMDSETGRSKGYGFVTFHN
SEDAKKALEQLNGFELAGRPMKVNHVTDRNDNSQGSSLLDLDEKERTGVELGATQRLQLM
AKLAEGTGLQLPPAAVNALHMPIQAMQASTPPIATQCFLLSNMFDPTSEQAPNWANEIRD
DVIQECNKHGGVFHVFVDKQSAQGNVYVKCPSIATAAASVNALHGRWFAGKMITAAYVPV
MSYHSLFPDAMTALQLLPLGM
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacgagatggcagacgagcttgatgttgatgcaatgctggaggctccttacaag
aaagatgatgactcagcaaccggcaatgcagactcggattccaaacagaatggacattcc
aaaagcagttcgcggagggaccgtgacagtagcaaggatcgtgacaaggacaggagcaaa
cgacggtcacggtcaagagatcgtcatacttcgcgtcgtggtcataggtcaaagtcccgt
gatcgcagatccaaatctcgtgatcgcaagagatccaggtcacgcgatcgtcggtctaaa
gatcgtgatacatcgaggcgttccaaggacaggctagatcgccctcgtgacagaagtcgc
cgttcatctagagacagatcgcgcaggtctcgggatagaaaaagatccgtcagtaagtcg
agggacaggaggcgatcgaagtcgcgagataggaagaagtcacgcagtaagtccaaagat
cgcaggaagtctagaggcactaggagccgttctagggatcgcaggaggcgcaacaggagt
ggcagcagaaggaggagtcgcaataggagcaccagtcatgaaattcacatcgaaactaag
aggcaacttacggctgaggagcgcgatgcccgaactgtgttctgcatgcagctgtcggca
cgtatcaaggcgcgggagctggaggaattcttctctgtagtgggcaaggtgaccgacgta
cggatcatcactgacgctaagacgcggcgctcgaagggcatcgcttacgtcgagtttgaa
gacgtagaatctgtgccgctggcactgggattggcgggtcagaaattgctcggtgtccct
attgtggtgcagcctacactggctgaacgcaacagggctgctaatatgaacaatcctgac
catggtaccaagcctgggtctggccccatgcgattatatgttggttcacttcacttcaac
atcaccgaagaaatgctcagaggaatatttgagcctttcgggaagatagacgttattcaa
ctcataatggattcagaaacaggacgttcgaaaggttatggatttgtaacgttccacaac
agtgaagatgccaagaaagccctggagcaattgaacggcttcgagctcgctggccgcccc
atgaaagtaaaccacgtcaccgaccgcaacgacaacagccaaggcagctcattgcttgac
ctcgatgagaaagaaagaactggcgtcgaattgggagcgactcagcgacttcagcttatg
gcaaagcttgcggagggcactgggctgcagttacctcctgctgcagtgaacgctctgcac
atgcccatacaagctatgcaggcttccacgcctcctatcgccacgcaatgtttcctacta
tccaacatgttcgacccgacttcagagcaggctcctaactgggccaacgaaatccgcgac
gatgtaatccaagagtgcaacaagcacggcggtgtcttccacgtcttcgttgacaagcag
tcggcgcagggcaacgtgtatgtcaagtgcccatctattgccactgccgccgcatctgtc
aatgccctacacggccgttggtttgctggtaaaatgatcacggcagcgtatgtgccagtg
atgagctatcactcgcttttcccggatgccatgactgctcttcaacttctgccactgggc
atgtga
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