Hyalella azteca: 108674046
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Entry
108674046 CDS
T07535
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33-like
KO
K15542
polyadenylation factor subunit 2
Organism
hazt
Hyalella azteca
Pathway
hazt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hazt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108674046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hazt03019
]
108674046
Messenger RNA biogenesis [BR:
hazt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
108674046
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_EML
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
WDR55
Beta-prop_IFT140_1st
EIF3I
WD40_Gbeta
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_Vps41
WD40_RFWD3
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_DCAF4
Beta-prop_WDR41
Tricorn_2nd
NBCH_WD40
Beta-prop_RIG_1st
PEP5_VPS11_N
WD_LRWD1
Beta-prop_WDR11_2nd
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
108674046
NCBI-ProteinID:
XP_018017434
UniProt:
A0A8B7NUJ9
LinkDB
All DBs
Position
Unknown
AA seq
959 aa
AA seq
DB search
MLSMYSQPPAPNLGPPPSVGMVNMPTSGLPPHHPPPNTSMPPPSHPPPGSTSFQALHFKP
FKTPESDFDGKRLRKSVMRKTVDYNSSIVAMLEARVWQRDERDRPTLQPDICYACEVMPP
QMYPDNPINAVVTKFVRTSTNKQKCPVFALAWTPEGRRLVTGASSGEFTLWNGLTFNFET
ILKAHESSVRSMLWSHNDQWMVTADTAGIVKYWQTNMNNVKHFQAHKDPVRGLSFSPCDL
KLATCSDDGTVRIWDFLRCKEERVLRGHGADVKCVAWHPSRSLLASGSKDNQQPIKLWDP
RTGTPLAKLHAHKSTVMDLKWNANGNWLCSASRDHLLKLFDVRNLGTEMQVFRGHKREAS
AIAWHPQHEGLFASGGSDGSILFWHVGNDKEVGSIDSAHDGIIWDLAWHPLGHILSTGSN
DHTTKFWTRNRPGDKMRDRYNLNTLPPGVLADDSMDIDDIPLSANYEHGNAVGGAAIPGM
GPDDKIQEAQADGGAETIPGLDFDAAQFERFIKKTPYAKPIPKNFQAAWNAAGGLEDEII
EDPSSSWVVTDVEGLFSEPVKREGPPVITETGEELPPGSVPLDEITADAIAYYGFFIPLD
KVPGNVIQDAFSFMHEDEAIAELTKDSDFARKLCREKRQLLNPNAKDDEGHHKGNQEDPF
NYHNTQSGSSQNNRTGRSGNFNRRDHDRRDGGQYNRDRGGSGGGSEDGRSFRGARGGYRG
GGDDDGFRNYRGRGRNWQNDRGGPPPKFRGRGGFNPENGGYRRDEGEREEWERDGRGGHE
EWMGRNEGADRFRESGGDRGGFNRRPWDDGGERRNWHDEGAGRDAWGPPRREEFVDRGGF
RERDGGFRNARDEGRGYPRDRAPFRRGVPGEDFYDRGFHGEDGGPVPPHPPVGEEQPDSF
RFQSRGRFRGREGREEEVGFKRKADWDDREEEWRWGRTGPGRPVRGRGGADHDFGYGGY
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgcttagcatgtactcccagcctcctgcccccaacttggggcctcctccctcagtgggg
atggtcaatatgcctacttctggccttcctccccaccaccctccccccaacaccagcatg
cctcccccttcccaccctcctccaggctccacttcatttcaagcactccacttcaagccg
ttcaaaaccccagaaagcgattttgatggcaagcgtctgcgcaagagcgtcatgcgcaag
acggttgactacaacagctcgatcgtggcgatgcttgaggcgcgcgtgtggcagcgagac
gagcgcgaccgccccactctgcagcctgacatctgctacgcctgcgaggtcatgccacct
cagatgtatcctgacaaccccatcaatgcggtcgtcaccaagtttgtccgcacatctact
aacaaacaaaagtgcccggtgtttgcattggcatggactccagagggccgtcgtctggtg
acgggggcctcgtcaggagagttcaccctctggaacggcctcaccttcaactttgagacc
atccttaaggcgcatgagtcaagcgtgcggtcgatgctgtggtctcacaacgaccaatgg
atggtcacggcagacacggccggcatcgtcaagtattggcagaccaacatgaacaacgtc
aagcacttccaggcacataaagaccccgttagaggactcagcttctccccgtgcgacctc
aagctggccacctgctccgacgacggaaccgtccgcatctgggacttcctcaggtgtaag
gaggagcgcgtgcttaggggtcacggagcagacgtaaaatgcgtcgcgtggcatccgagc
cgcagcctgctggcgtccggcagcaaagataaccaacagcccatcaaactgtgggatcct
cgcaccggcacccctcttgctaaactacacgctcacaagagcacagtcatggacctcaaa
tggaacgccaacggcaactggctgtgctcggcttcccgcgaccacttgctcaaactcttc
gatgtgcgcaacctgggcactgaaatgcaggtgttccgcggccacaagcgcgaggcctcg
gccatcgcctggcatcctcagcacgaaggtctgtttgcgagcggagggtcggacggatcc
atcctcttctggcacgttggcaacgataaggaagtcggtagcatcgactctgctcatgac
ggcatcatttgggacctggcatggcatcctctaggtcacattctatcgacgggatcaaat
gaccacaccaccaaattctggacgcggaaccgtcccggcgacaagatgagggatcgctac
aacttgaacacgctgccgcctggcgtcctcgctgatgactcgatggacatcgacgatatt
ccgctgtccgcgaattacgagcacggcaatgcagtgggcggcgcagcgatcccgggcatg
ggtcctgacgataagatccaagaggcacaggctgatggtggggctgaaaccatcccaggt
ctggactttgacgcagcgcagttcgaaaggtttattaagaagacgccatatgctaaacct
atccccaaaaacttccaggcggcttggaacgcggctggtggactggaggacgagataatt
gaagatccttcttcgagctgggtggtgactgacgtggagggcctgttcagcgagcccgtc
aagagagaaggtcctcctgtcatcacggagacgggggaggagctacccccaggctctgtg
ccccttgatgagataacggccgatgctatcgcttattacggcttcttcatcccacttgac
aaggtgcctggcaacgtcatacaagacgccttcagcttcatgcacgaggacgaagccatt
gctgaactcaccaaagacagcgattttgctcgcaaactttgccgggaaaagcgccagctt
ctcaacccgaacgccaaggacgacgaaggtcaccataaagggaaccaggaagaccccttc
aactaccacaacacacagagcggctcgtctcaaaataaccgcactggccgtagcggcaac
tttaatcgtcgagaccacgacaggcgggatggcggccagtataatcgggatcgtggtggc
agtggaggaggttctgaagatggacgatcttttcggggagcaagaggagggtatcgcggg
ggtggtgacgacgatgggttcaggaattatcgaggtcgagggcgtaactggcaaaacgac
agaggcggccctccgcctaagtttagaggaagaggtggtttcaatcccgagaacggagga
tatcgtcgcgacgaaggagagagggaggaatgggagcgggatggaagaggaggtcatgag
gagtggatgggacgcaatgaaggcgcagaccgtttcagagaaagtggaggggatagaggc
ggattcaatcgacgtccttgggatgacggaggtgaaaggaggaactggcatgacgaagga
gctggacgtgatgcttggggtcctccgagaagagaagagtttgtggacaggggaggcttc
agagagagagatgggggctttaggaacgcccgagacgagggcagaggctatcctcgtgac
agagcacccttccgaagaggtgttcccggagaggatttttatgatcgtggatttcatggg
gaagatgggggtcctgttcctccccatccccctgtaggtgaggagcaacccgacagtttc
cgcttccagtcgagaggaaggttcaggggcagggaaggtagggaggaggaggttggtttt
aagaggaaggcagattgggatgatcgggaggaggaatggaggtggggaagaacgggtccg
ggaaggcccgttagagggaggggtggggcagaccatgactttgggtacggtggatactaa
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integrated database retrieval system
