Hyalella azteca: 108674057
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Entry
108674057 CDS
T07535
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
hazt
Hyalella azteca
Pathway
hazt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hazt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108674057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hazt03019
]
108674057
03012 Translation factors [BR:
hazt03012
]
108674057
Enzymes [BR:
hazt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108674057
Messenger RNA biogenesis [BR:
hazt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
108674057
Translation factors [BR:
hazt03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
108674057
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_C
HA2_N
AAA_22
nSTAND3
AAA_19
NACHT
TsaE
ATPase
PhoH
NB-ARC
T2SSE
ABC_tran
AAA_7
AAA_16
NPHP3_N
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
108674057
NCBI-ProteinID:
XP_018017445
UniProt:
A0A8B7NUQ8
LinkDB
All DBs
Position
Unknown
AA seq
1045 aa
AA seq
DB search
MNSGSGGYRGFVRYIQGRGSRGRGRGHRNRDGRHFDSDTGPHSGDRSDHYRRGHRDESGR
GNAGRPRPPPHLRGREIGMWYRDNARNSKSDKHLMASLSMDSEQAQSLDRVLDSIGGSKG
RRQDSRPGSSDHDSFSHPEQWLADQHSQKCTDEKMLVQPEQQQPQAISTYTRTIDGMKDS
AFKRAYMDNVSANQLEDEIKSEFTLESLKQNSQLDSAYREELIELRKTERYKKMLEFRKR
LPSYTMQEEILQLVKNNQVVVLSGETGCGKTTQVPQFVMEQEVEAGRGSACHVVCTQPRR
ISAISVAQRVAQERGESLGHSVGYQIRLEAVKCRSRGSVMYCTTGIVLQMLQGDPLLSSV
SHLVLDEIHERDTQSDFLIAITKDLLPKRPDLKLILMSATLNAEKFSEYYGGCPMIHIPG
FTFPVTEYYLEDILDTIRFEFPPPKGKEPIWAQRRNKSSSGSELFRNTVLPWVDSQEASG
AISRGAAYELRKPHSEELCPQLIVSLLRHICRQPPGAVLVFVPGWGDISTLNKLMDEDSF
LRGQRLLVIPLHSLMPTANQREVFDHPPSGVRKVVLATNIAETSITIDDIVYVIDSGYIK
MTNFDKSSNLSTLASEWVTKANAHQRRGRAGRVQAGVCYHLFTRIREQNLAEYPLPEILR
TRLEEIVLNVKILKLGRALPFLQKLMQSPDEEVLKISIKLLEAINALDDDENLTPLGFHL
ARLPIDPLTGRMLLMSAFFSCVDPILTVAAVLSFKEPFVVPLGKEKLVDQVKARFAGNTY
SDHLMYVRVFDSWREACDNRDNSFCYKNFLSTSVLQQIKRMRDQFFGLLKDHKFVAPEVR
SGSDIEINLNSGNVAVVRAVIASGLYPNVACLKRTGKSSSKRPKIMRTADHNRVLFHPKC
VNDKMQAFESPWMVFREKLKMSSVFLFDATNVPNYPLLLFGQRLEYVAAEGAIDVDGFVK
IRCTEQVANVIRKLRKELDAVLEYKISHPDVSRWDQHSKEGKLLNAIVDLLSKEKIDPNQ
QYHPRYDVADDDDDEEMHEEYPSYT
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaggttcaggaggttatagaggatttgttcgttacatccaaggccgtggcagc
aggggacgaggaagagggcacagaaaccgtgatggaagacattttgactcagatactgga
cctcactcaggggacagaagtgatcactacagacgtgggcaccgggatgaatctggacga
gggaatgcaggcagaccaaggcctccaccccatctacggggcagagagattggcatgtgg
taccgagataatgcaagaaattctaaaagtgacaagcatcttatggcaagcttatccatg
gattcagaacaagctcagtctctggatcgtgttttagattctattggtggctcaaaagga
cggagacaagattcacgacctggtagctctgatcacgatagcttcagccaccctgaacaa
tggcttgctgatcagcactcgcagaaatgtacagatgaaaagatgttggtgcaaccagag
caacaacagcctcaagcgatctcaacctatactcgtacaattgatgggatgaaagactcg
gctttcaagcgtgcctacatggacaatgttagcgctaaccagttggaagatgagattaaa
tcggaatttactttggaaagcttgaaacaaaactctcaactcgacagtgcatatcgggaa
gagctgattgaactaaggaaaactgagaggtacaaaaaaatgctggagtttcgtaagcgt
ttgccatcctacacaatgcaggaagaaatcttacagctcgtgaagaacaatcaagtggtt
gtgcttagtggagaaactggctgtggcaagactactcaagttccccagttcgtgatggag
caggaagtggaggctggccgtgggtcggcctgccatgtggtatgcacgcagccgcgccgc
atctctgccatcagcgtcgctcagcgcgtggcccaagagcgcggcgagagcctcggccac
agcgtcggataccaaattcgtcttgaggctgtaaaatgtcggagtagagggagtgtaatg
tactgcactacgggcatcgtgctgcagatgctgcagggagatcctctcctcagttcggtg
tcacatctcgtgctcgacgagattcacgagcgtgacacgcagtcggacttcctcatcgcc
attactaaggatctattacctaagcgaccagatttgaagttaatcctgatgagcgccacc
ctgaatgccgagaagttctccgagtactatggtggctgtcccatgatccatattcctggc
tttactttcccggtcactgagtattacttggaagacatcctggatactatacgcttcgag
tttccacctccaaaaggcaaggagcctatctgggctcagcggcgcaacaagagctcgtca
ggtagcgaattgtttagaaacaccgtcttaccgtgggtcgactctcaggaagcgagtgga
gcgatatcaagaggtgctgcttatgaactccggaagccgcacagcgaagagctttgccct
cagctcatagtgagtctactccgccacatctgccgccagcctcctggtgccgtgctggtg
tttgtgccaggctggggcgatatctcgacactgaacaaactcatggacgaggactcgttc
cttcgcggccagaggcttctggtcatcccactgcactcgctcatgcccacagccaaccag
agggaggttttcgatcatcccccatcaggtgtgcgcaaggttgttcttgccacgaatatt
gccgagacgagcatcacgattgatgacattgtttacgtcatcgacagcggctatatcaaa
atgaccaactttgataaaagctcgaatttgtcgacgctggcgtcggagtgggtgaccaaa
gccaacgctcaccagaggagaggcagggcaggcagagtgcaggctggggtttgctatcat
cttttcacccgcatcagagaacaaaacctcgcagaatatccccttccggagattctacgc
actcggctggaagaaatcgtcttgaatgttaaaattctcaaacttggtagagccttgcct
ttcctacagaaactaatgcagtcaccagacgaagaggtgctcaaaatttctataaagtta
ttagaagccattaatgctttagacgatgatgagaacctgacgcctctgggcttccatcta
gcgcggctgccgatcgatcctctgacgggccgcatgctcctcatgagcgccttcttctcc
tgtgtggaccccatcctgaccgtcgctgccgtgctctctttcaaggagcctttcgtggtg
cccctgggtaaggagaagttggttgaccaagtgaaggcacgatttgcaggcaacacttat
agcgaccatctgatgtacgtgagagtttttgacagctggagggaagcgtgcgacaaccgc
gacaacagcttctgctataagaacttcctctccacgtctgtgctacagcagatcaaacgc
atgcgagaccaattcttcgggttactcaaagaccacaaatttgtggcaccagaagtacgg
agcggctccgacatcgaaattaatcttaactccggcaacgttgccgtagtgcgcgccgtt
attgcctccggtctgtaccctaacgtggcgtgcctcaagcgcacgggcaagtcctcctca
aagcgaccaaaaataatgaggaccgccgaccacaaccgcgttctcttccatcctaaatgc
gtcaacgataaaatgcaagcgttcgaatcgccgtggatggtcttcagggagaaactgaag
atgagcagtgtattcctgttcgacgctacgaacgttccgaactacccgctgcttctgttc
ggccagcgccttgagtacgtggcagctgaaggcgccattgacgtcgacggcttcgtaaag
attaggtgcaccgaacaagtcgctaacgtcatccgcaaactcaggaaggaactcgacgcc
gtactggagtataaaataagtcatcctgacgtctcacgttgggatcagcactcgaaggaa
ggcaagctgctcaacgctattgtagatctcctgtccaaggagaaaatcgatccaaatcag
caatatcatccgcggtatgacgtcgccgacgacgacgatgatgaagaaatgcatgaagaa
tatcctagctatacatag
DBGET
integrated database retrieval system
