Hyalella azteca: 108674303
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Entry
108674303 CDS
T07535
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
hazt
Hyalella azteca
Pathway
hazt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hazt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
108674303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hazt03400
]
108674303
DNA repair and recombination proteins [BR:
hazt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
108674303
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
Motif
Other DBs
NCBI-GeneID:
108674303
NCBI-ProteinID:
XP_047741748
UniProt:
A0A979FY24
LinkDB
All DBs
Position
Unknown
AA seq
712 aa
AA seq
DB search
IDQTKEDGVHVGAAFIDTSLGVFHLGQFCDDRHHSRLRTLLAHHPPAQLLTERNKLVTSV
RQVLAQCGVPPSLHEALTTSTEFWTAEKTLQFLAQQECMKSETGGVDWPDELKSLLTDDC
SSPVENTSDLSLSALGALLWYLQRCYLHDQLLSQRLFQIYVPPDLRDQISSLEPAAQQRV
FFKQRHMVIDGSSLTNLEVLRNNNTGDVAGSLCSLLDYTATPMGKRLLQQWVSAPLMCNK
AISARQEAVLELRKLSSAVEETVSLFSKLPDIQRLLPRIHSQGLRLSPDDPNSRAVLFEE
QQYSKKRVLSFLAATQAFAAITKIPALFHAEVESVLLRSLVTLTTDGGKLPSMEDTLLFF
ERAFDHELAKKEGKIIPSSGVDVQYDKAMEEIKRTENELEEYLKEENAFFGSKVVYFGSD
RRRYQLEVSEAASKKATSEYELVSQRKGFKRFHTARSKELLAQMTAAEEAREVALKDIAR
RIFQQFDDKQDLWSAAVDCVATLDVLMSLTKYSLSIADAATPEICDAESSEEAFLEIRDG
LHPCILSSQEGIIPNDVVLGRGAGEGAHCPLVLVTGPNMGGKSTLMRQTALLTIMAQIGS
LVPCSSMRLTPVDRIFTRVGASDRMLAGESTFLLELRETAAILQHATPHALVLIDELGRG
TATHDGTAVAWAVAGALVERRCRTLFSTHYHGLVHHFAHTPGVSMGHMLRKS
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
attgaccagactaaagaagacggtgtacacgtgggggcagcattcattgatacaagtcta
ggagtgttccacctcggtcagttctgtgatgaccgtcaccacagcagactgcgtacccta
ctagctcaccatccgcctgctcagctattaacggagcgaaacaagcttgttaccagcgta
cgtcaagtgctcgctcagtgtggcgtgccaccgagtctccatgaagccttaacgacttca
accgagttctggacggctgaaaaaacccttcagtttctggcccagcaggagtgtatgaag
tctgaaactggtggtgttgactggcctgatgaactgaagtctcttctcacggacgactgt
tccagtcctgtggagaacactagtgacctgagcctgagtgcgctgggtgctctgttgtgg
tacctacagcgttgctacctgcacgaccagctgctcagtcaacgcttgttccaaatttat
gttcctcctgatctacgagaccaaatatcatcacttgaacctgcagcacagcaacgtgtt
ttcttcaaacagcgacacatggtaatcgatggcagtagcttgactaacttggaagttcta
cgcaacaacaacactggagacgtggctggctctctctgctcactgctggactacactgct
acacctatgggcaaaaggttgctgcagcagtgggtgtcagcacccctgatgtgcaacaag
gccatttcagctcgtcaagaagctgtcttggagctgcgtaagctgagctctgcagttgaa
gaaactgtatcactcttctctaaacttcctgacattcaacggctcttaccgcggattcac
agccaaggactacgcctgagtcctgacgatcccaactctcgtgccgtgctgttcgaggag
cagcagtacagcaagaaacgcgtcctctctttcctggccgcaacgcaagccttcgctgcc
atcacaaagatacctgcattattccatgcagaagtagaatctgtgttgctgcgttcactt
gtgacgctcactactgatggcggcaaattgccttccatggaagacactctgctatttttt
gagcgagcctttgatcacgagcttgcaaagaaggaaggaaagatcataccgagcagtggt
gtggatgtgcagtatgacaaagctatggaagaaatcaagagaacagagaacgaacttgaa
gaatatttgaaagaagaaaatgctttctttggcagcaaggtagtttattttggcagcgat
cgcagacgctatcaactagaggtctcagaggcagccagcaagaaggccacttcggagtac
gaacttgtgtcccagagaaaaggattcaagaggttccatacagcacgcagcaaggagctg
ctggctcagatgacagctgctgaggaggccagagaggttgcgcttaaggacatcgctcgt
agaatatttcagcagtttgatgacaaacaggacctgtggagtgctgccgtggactgtgta
gctacattagacgtgcttatgagcctcacgaagtacagcctgtctatagctgacgctgcc
actcctgaaatatgtgacgctgagtcttcagaagaggcgttcctggagatacgcgatggc
ttgcacccctgcatcctctccagccaagagggcatcatcccgaacgacgtggtgctgggc
aggggggctggtgagggggcacactgccccctggtcctcgtcacgggtcccaacatgggc
ggcaagagtacactcatgaggcagacggcgctgcttaccatcatggcgcaaattggaagc
ttggtaccgtgtagttccatgcgcctgactcccgtggaccgaatcttcacacgagttgga
gccagcgacaggatgctggctggggagagcacgttcttgctggagctgcgtgagaccgca
gccatcctacagcacgccacgccgcatgctcttgtgctcatagatgaactcggtcgtggc
acggcgacgcacgacggcacggccgtagcgtgggcggtagcaggggcgctggtagagcgt
cgctgtcgtacgctcttctctacacactaccacggcctcgtgcaccacttcgctcacacc
cccggcgtctccatggggcacatgttgcgcaaatcctga
DBGET
integrated database retrieval system