Hyalella azteca: 108674720 Help Entry 108674720         CDS       T07535                                  Name (RefSeq) symplekin   KO K06100   symplekin Organism hazt  Hyalella azteca Pathway hazt03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:hazt00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     108674720  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:hazt03021]     108674720    03019 Messenger RNA biogenesis [BR:hazt03019]     108674720 Transcription machinery [BR:hazt03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      108674720 Messenger RNA biogenesis [BR:hazt03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      108674720     U7-dependent histone pre-mRNA processing factors      108674720 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N zf-SAP30 Motif Other DBs NCBI-GeneID:  108674720 NCBI-ProteinID:  XP_018018176 UniProt:  A0A8B7NZ82 LinkDB All DBs Position Unknown AA seq 1130 aa AA seqDB search MLSQVQELVVHRQPDLLDTFYEEVVAFQSDKNSDVRKWVVGFIEEACKKDGRMLPLLLPN VQLLLEDGTVSVVKRCVQATAPLHKCTLVWVTSAHTITSDMELAWIILTGIKSKVTAMID HENDGVRTQVIKCMESMILVQSYSETTSVHRERENVPFCLDRVPLTLKLTRPRKLEDEAK QMVQKLVSFLGSIHISSVNLMTCMSSLVILARARPIFLPSVVQSLELLHANLPPTLSKSQ VNSVRKHLKLQLINLLKHPSACDFHDNIITVLTDLGMSSSEINKAVPNREEIRRQAKKRE RAKAAAVAKKEDGNEGSARKRARLSNSTLTSNKDIPEDHKNTIKSKNTSQDTPSTLASLT KIKTETIDSKKIEDEGGEDDEKEETAGTLLDMTTKWVLRRLTIDNVTELVMTSMLSLPPT MPGLFSAGYTPVSGAGTLQQKQQLSRLLASQLVAANVSPMGQLPPQTSVAPMAEGLTEED IQRLGDSDDEGPFVSFLGSRPPNLSAPPPALPAPILAPIRHKIQAVKLSEVTPVLSEQQQ RSLSICLVRNLLRSYHFNNLSQLDKKHRMHMIAKLLAFSSADEIRGVEDTMLQDPSKYCD LIELWIFCVHSATCDFSQLARITGRSHKKKVLTSKQEYDDMLVRVVRSIVPQCTEQTYRD LLSRLLLSCPAVPVTVVSALVECAVSDNNNSSALVCYSAPLLRDLALWRSNVATHTLALL CSLAMHSDDQVRKAILQEAEAILLIGGSQAESIMSAGRRQLLYLEQPEPPDAMFAEFLGR PTKLEEWDEATVKACLDLPLTILPLHEALVHDLALVYIKTVNEAKRGILRLLEGPVSLMG MDSPQLLALVRSTPKGSETLITRIIHILTEKAPPSEALVCQVRELYNRRVSDVRFLIPVL TGLSKKEIIAVLHKLIKLNPHVVKEVFNRLWGVALDSGTSPLSPVELLVALHLIEADKCD VKTVIKATGLCFQERSIYTAEVLAEVLQQLLDEPVIPTLFMRTVIMTLTHHPQLLSLIIS VLLKLIEKKVWEQPKIWEGFVKCCERASPQCVAVLLQLPIQQLSDAFEASSMLKNTLATH IKSLTKHQKSSIGLDVLALVGALDETPDDQDRAAATTAPVREIPAPLQLA NT seq 3393 nt NT seq  +upstreamnt  +downstreamnt atgctcagtcaagtgcaagagcttgttgtacacagacagcctgacctacttgacactttt tacgaagaagttgttgcttttcaaagtgacaaaaattctgatgtccgaaaatgggtcgtt ggcttcattgaagaagcttgcaagaaagatggtcgcatgttgcccctgctgctgcccaat gttcaactacttcttgaagacgggactgtgagtgtggttaagcgctgtgtgcaagccaca gctcctctacacaagtgcacccttgtatgggttacatcagcccacacaatcacttctgac atggagctggcatggattattctcacaggcatcaaatccaaagtaactgcaatgattgac catgagaatgatggagtgcgcactcaagtaatcaagtgtatggagtccatgattctggtg cagagctacagtgaaaccacatctgtgcacagagagcgggagaatgtcccattctgcctc gacagagtccctctcactcttaagctcactaggcccagaaagcttgaggatgaagccaaa cagatggtgcagaagttagtgagtttcctgggtagtattcacatcagctcggtgaacctg atgacttgcatgagctccctggtgattttagcgagggctcgtcccatcttcctgccttct gtcgtccagtctctggaactcctccatgccaatcttccacccactctgtccaaatctcaa gttaacagtgttcgtaagcatctcaagctgcagctcatcaaccttctgaagcacccaagt gcctgtgacttccacgacaacattattacagtacttactgatctcggcatgagcagcagt gagatcaacaaagcagttccgaaccgagaagagatccggaggcaggctaagaagcgcgag cgagccaaggcggctgcggtggccaagaaagaggacggtaatgaaggatcggcgaggaag cgcgctaggttgagtaactcaaccttgacttctaacaaagacattcctgaagatcataaa aataccattaaaagtaaaaacacatcacaggacacaccttctactttagcatcacttact aaaatcaaaactgaaactatagattctaagaaaattgaagacgaaggcggagaagatgat gagaaggaagaaacggctggaacgttgctcgacatgacgaccaagtgggtgctacgacgt ctgactattgacaacgtcactgaactcgtcatgaccagcatgctgtcgctcccccccaca atgccggggctgttcagcgcaggctacacgcccgtgtcaggcgctggcacgctgcagcag aagcagcagctctcacggctgctggcctctcagctggttgctgcgaacgtgtcgcccatg ggccagctgccgccccagacttcagtcgctcctatggctgaaggactaaccgaggaagat attcagcgcctgggcgacagtgacgacgaaggcccctttgtgtccttcctgggctcccgt cctcccaatctatctgcccctcctcccgcattgccagccccaatattggcaccaattcgt cacaagatccaggccgtgaagctctccgaggtgacgccggtgttgtcagagcagcagcag cgctcgcttagcatctgcctcgtccgcaatcttctcaggagctaccacttcaataatctc agccagctggacaagaaacatcgtatgcatatgattgcaaaacttttggccttttcttct gcagatgaaattcgaggagtggaagatacgatgctacaagacccgtctaagtattgtgac ctcatagagctgtggattttctgtgtacattctgccacttgtgacttctctcagctggca agaataactggtcgcagccacaagaagaaggttctcacgagcaaacaagaatacgacgac atgctcgtgcgcgtcgtgaggagtattgtcccgcagtgcaccgaacaaacttaccgggat ttgttgtcacgactgttactgtcgtgtccggcggtaccggttactgttgtgtcggcgctg gtggagtgcgcggtgtccgacaacaacaacagctcggctctggtctgctactcagcgccg ctgctgcgggacttggcgctctggcggtccaacgtcgccacacacacactcgcccttctg tgcagccttgccatgcacagcgacgaccaggtacgaaaggctattctgcaagaagctgag gcaattcttctaattggtggcagtcaagcagagtcgatcatgtcagcaggacgtcgccag ctgctgtacctggagcagcctgagcctcctgacgcgatgttcgccgagttcctcggtcgc cccaccaagctcgaggagtgggacgaagccactgtcaaggcctgcctcgacctccccctc accatcctaccgctgcacgaggcgctcgtgcatgatttagcgctggtttacatcaagact gtgaacgaggcgaagcgtggcatcctccgcctgctggagggccccgtgagcctcatgggc atggactcgccgcagctgctggctctggtgcgctcgacgcctaagggcagcgagacgctc atcacgcgcatcatccacatcctcacagagaaagctcctccgagcgaggcgctggtgtgt caggtccgtgagctgtacaacaggagggtgagcgacgtgcgcttcctcattccggtgctc acggggctcagtaagaaagaaattatcgccgtgctccacaagctcatcaaactcaaccca cacgtcgtcaaagaggtgttcaacagactatggggcgtggcactcgactctgggacgtct ccgttatcgcctgtggagcttcttgttgctctgcatctcatagaggcggacaagtgtgac gtcaagacggttattaaagcgacggggctgtgcttccaagagcgctcgatctacactgcg gaggtgctggctgaggtgctgcagcagctgctcgacgagcctgtcatcccgacgctcttc atgcgcaccgtcatcatgaccctcactcaccatcctcagctcctgtcacttatcatcagt gttctgctcaaactcattgagaagaaggtttgggagcagccgaagatctgggaaggcttc gtgaagtgctgcgagcgagccagcccgcagtgcgtggctgtcttgctacagcttcccatc cagcagctctcggacgctttcgaggcttcttctatgctgaaaaatacactcgcgacgcac attaaatcactcaccaagcatcagaaatcgagtatcggcttggacgtattagcgctcgtg ggcgcgctggacgagacgcctgacgaccaggaccgcgccgccgccaccaccgcaccagtt cgggaaattcctgctcctctccagctcgcctaa

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