Hyalella azteca: 108675170
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Entry
108675170 CDS
T07535
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
hazt
Hyalella azteca
Pathway
hazt03020
RNA polymerase
hazt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hazt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108675170
09124 Replication and repair
03420 Nucleotide excision repair
108675170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hazt03021
]
108675170
03400 DNA repair and recombination proteins [BR:
hazt03400
]
108675170
Enzymes [BR:
hazt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
108675170
Transcription machinery [BR:
hazt03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
108675170
DNA repair and recombination proteins [BR:
hazt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
108675170
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
108675170
NCBI-ProteinID:
XP_018018651
UniProt:
A0A8B7P0P5
LinkDB
All DBs
Position
Unknown
AA seq
1181 aa
AA seq
DB search
MNPYADIDDDLTYGEDESDEITAELWQEACWLVISSYFDEKGLVRQQLDSFDEFITMTIQ
RIVEDSLDIDLQAEAQHTSGELDTPPRHVLKFEQIYLSKPTNWEKDGYNYNMMPNEARLR
NLTYSSPLYVDIVKTIFRDGEEPTEKKSEKVYIGKIPIMLRSAYCLLSDLADRDLNEVNE
CPLDPGGYFVINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKCEIRSCIEHSARPVSTLW
VNMMARGGSSAKKAAIGQRIIAILPYVKQEIPVMIVFRALGFVADRDILEHIIYDFDDPE
MMEMVKPSLDEAFVIQEQNVALNFIGGRGARPGVTKEKRIKYAKEILQKEMLPHVGVSDF
CETKKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLDLAGPLMALLFRGLFRNLLKEVR
MHAQKLLDKGSDYALDAAVKPKLITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFA
STLSHLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGAAVGLVKNLALMSYISVGS
QPAPILEFLEEWSMENLEEIASSSIHDATKIFVNGCWVGIHRDPEQLMVTLRKLRRQMDI
IVSEVCMVRDIRDKEIRIYTDAGRICRPLLVVESGLLLLKKRHIDQLKEREYTNFSWQDL
VASGVVEYIDCAEEETIMIAMELAELNQDGEDKPYCNTYTHCEIHTAMILGVCASIIPFP
DHNQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLFYPQKPMVTTRSMEYLRFRELPA
GINSIVGIACYGGYNQEDSVIMNLSTVERGFFRSCFYRSYKEAESRRQGMQDEVFEKPSR
DTTQGMRHAIYDKLDDDGIIAPGMRVSGDDVIIGKTISLPENEDELEGQTRRFTKRDASS
FLRGSETGIVDQVMLTVNIDGDRFTKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRMEDI
LFTAEGVTPDIVINPHAIPSRMTIGHLIECIQGKLGAIKGEIGDATPFNDAVNVNKISTL
LHDYGYNLRGNEVMYCGHTGRKMAAQIFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQP
MEGRAREGGLRFGEMERDCQIAHGAAQFLRERLFEVSDPYSIHVCNLCGLMCIANLRNNT
FECKGCRNKTQISLVKLPYACKLLWQELMCMNIAPRLMVIK
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgaatccttacgctgatattgatgatgatttgacctatggagaggatgaaagtgatgaa
attactgctgagctgtggcaggaagcttgttggcttgtcatctcatcatattttgatgag
aagggattggtgcggcagcagcttgactcctttgatgagttcatcaccatgaccatccag
cggatagttgaagactccctggatattgacttacaagctgaggctcaacacacctctgga
gaacttgatactccaccacggcatgtgctaaaatttgagcaaatttacctgagcaaacca
acaaactgggagaaagatggctacaattacaacatgatgccaaatgaagcccgactcagg
aatttgacatactcttcaccactgtatgtagatattgtgaaaactatcttcagagatgga
gaagagcccacagagaagaagtctgaaaaagtctacattggtaaaatccccatcatgctc
cggtcagcctactgcttgctcagtgacctcgcagatcgtgacttgaatgaggtcaatgag
tgccctttggatcctggcggatacttcgttatcaacggctctgagaaggtgctcattgct
caagaaaagatggctaccaacactgtatatgtgttcagcatgaaagatggcaaatatgca
tacaagtgtgagattagatcttgtattgaacactcggctcgacctgtctccactctctgg
gtcaacatgatggcgagaggtggaagtagtgccaaaaaagctgccattgggcaacggatc
attgccatcttgccgtacgtgaagcaagagattcccgtcatgattgtgttcagagcgctc
gggttcgtggccgacagagacatcctggaacacatcatctatgacttcgatgatcctgaa
atgatggaaatggtgaaaccttcactggatgaagcttttgtcatccaagaacaaaacgtg
gctcttaacttcattggaggccgtggtgcacgacctggtgtcacgaaggagaagagaatc
aagtatgcaaaagaaattcttcaaaaagaaatgttgccacacgtcggcgtctccgatttc
tgtgaaactaagaaagcatattttcttggttacatggttcacaggctactattggcttcg
ctcggtcgtcgtgagctggatgaccgcgatcactacggcaacaaacgcctcgacctggcg
ggtcccctcatggctctgctcttcagagggctgttccgcaacctgctgaaagaggtgcgc
atgcatgctcagaagctgctggacaaaggctcagactatgccctcgatgccgctgtcaaa
ccaaagctcatcaccgacgggctgcgctactctctggccacgggcaactggggcgaccag
aagaaggctcatcaggccagagcgggcgtgtctcaggtgttgaaccgcttgacttttgcg
tcgaccctgtcgcatttgcgtcgtgtcaactcgcccattggtcgcgacggcaagcttgcc
aagcctcgtcagctgcacaacaccctgtggggaatgatatgccctgccgagactcctgaa
ggtgccgccgtgggccttgtcaaaaaccttgctctcatgtcctacatttccgttggatct
cagcctgcacccatccttgaattcttggaggagtggtcaatggagaacctagaggagatc
gcatcaagttctattcacgacgccactaaaatattcgtcaacggttgctgggtaggaatt
catcgcgatcccgagcagctcatggtgaccttgcgaaagttacgaagacagatggatatc
atcgtgtcagaagtttgcatggtgcgcgatattcgtgacaaggaaattcgaatctacact
gacgccggccgtatttgccgtccgctgctcgtcgtcgagagtggtttgctgctactgaag
aaacgccacatcgatcaactgaaggagagggagtataccaacttcagctggcaggaccta
gttgccagcggcgtcgtagaatacatcgactgtgctgaagaagagaccatcatgatcgct
atggaattggcagagctcaaccaagatggtgaagacaaaccttactgtaacacatacaca
cactgcgagattcacaccgccatgatcttgggcgtgtgtgcctccattattcctttccca
gatcacaatcagtctcccaggaacacttaccaaagtgctatgggtaagcaagctatgggt
gtctacatcacaaacttccacgtgcgaatggacactcttgctcacgtgttgttctaccct
cagaagcccatggtcactacgcgttccatggaatatctgcgtttcagagaactgcctgcc
ggtattaacagcattgtcggaattgcctgctatggtggatacaaccaagaagattccgtc
atcatgaatctctcgactgtggagagaggcttcttcagatcgtgtttctacagatcatac
aaagaagccgagagccgacgacagggcatgcaagatgaggtgtttgagaaaccttccagg
gataccactcagggcatgcgtcacgccatctacgacaagctcgatgacgatggaatcatt
gctcctggaatgcgcgtgtccggtgatgacgtcatcatcggcaagacgatctccttgcct
gaaaacgaggatgaactcgagggccaaactcgtcgcttcactaagagagatgcctcctcc
ttcttgcgaggctctgagaccggtattgttgatcaggtcatgctgaccgtcaacatcgac
ggcgatcgcttcaccaagatccgcgtgcgttctgtccgcatccctcagattggcgacaaa
tttgcttccaggcatggacagaaaggaacctgtggcatccaatatcgtatggaggacatt
ttgttcaccgctgaaggcgtcacacccgacatcgttattaacccgcatgccattccgtca
cgtatgactattggccatcttatcgagtgcatccaaggaaaactcggtgccatcaaagga
gaaattggcgacgccacgccattcaacgatgccgtcaacgtcaataaaatctcaactcta
ctgcacgattacggctacaatctcagaggcaacgaggtcatgtactgcggtcacactggt
cgcaagatggctgcccagattttcttgggccccacatattaccagcgactgaaacacatg
gtggatgacaaaattcactccagagccagaggacctgtgcagattctcgttaggcaaccc
atggagggcagggcgagagaaggtggtttgcgtttcggggagatggagcgtgattgtcag
atcgcccacggtgctgcccaattcttgagagaacgtctcttcgaagtgagcgatccgtac
agcatccacgtttgcaacttgtgtggtctcatgtgcatcgcaaacctcagaaacaatacc
ttcgagtgcaagggctgcagaaacaagacacagatttccctggttaaactcccgtacgct
tgcaagctgttatggcaagaactgatgtgcatgaatatcgcccctcgcctcatggttata
aaataa
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integrated database retrieval system
