KEGG   Hyalella azteca: 108675457
Entry
108675457         CDS       T07535                                 
Name
(RefSeq) DNA repair protein XRCC1 isoform X2
  KO
K10803  DNA-repair protein XRCC1
Organism
hazt  Hyalella azteca
Pathway
hazt03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hazt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    108675457
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hazt03400]
    108675457
DNA repair and recombination proteins [BR:hazt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     108675457
SSDB
Motif
Pfam: XRCC1_N BRCT LIG3_BRCT PTCB-BRCT BRCT_2 RTT107_BRCT_5 DUF3519
Other DBs
NCBI-GeneID: 108675457
NCBI-ProteinID: XP_018018970
UniProt: A0A8B7NZ45
LinkDB
Position
Unknown
AA seq 688 aa
MPLIKFASIASFTSEDLNHPADNLLRSQTYRKWRIAPTECGKPASVTIKLEKLSTITAVD
IGNDGCAFVEVLVARDDNNFEVLLPASSFMSLLQSRNGTDMNRVRMFTAHHLNKNISSQK
WNTVKLVCTQPFNKMNAFGLTFVTLTTDEQQPEQKPAPQQDSTSHGILQLKEAVCDETGT
SKSSINIGSFFAKRKKLESDATDNKFNCKDSQEAIPLSKKARSEESKGSLSRQSTSTLRN
PVKINRAPEKNSLSHSSPAATTRAPNSSEKQNPSVHDKASSRTVASPSVAKMKPTTTSSQ
SPASDKEYKARQPTHLDTPSSSDVPFRSILRGVIYTMSGYKNPQRSKLRDKMADMGASYR
PDWTDDCTHLICAFTNTPKYRAVRGKGHIVTHRWIEECALFKKKMPLKKYLLDPEDEDCL
NSSSVRDTSSSPKTKASPSPPNSADPSPTPLSVAKQSSAVRTAASPTEESADSTQSNRHE
DTLTEPENLEDGSLHGDASDEEDTDDEIQRAMGGRSATKNGQSAASSDCPNDVLGRETSS
HVKCNSSSPSGKEVTYEKNGSSSPIDAYSADTDEDEGSSPLRQQIDTSQLDLPLLPDIFS
GEHFFIHRSCHDPADVKRYIIAFNGHVSDYMSSCVNFIVADAKWDKTFDEVTQENQEVRF
VKPSWIWRCVDASSRAPLEPHLITSKRS
NT seq 2067 nt   +upstreamnt  +downstreamnt
atgcctctcattaaatttgccagcatagcttctttcacatcagaagatctgaatcaccct
gctgacaacttgctgagatcacagacataccggaagtggaggatagctccaactgaatgc
gggaagcctgcgtctgtcaccataaaactggaaaaactctctacaatcactgcagttgat
attggcaatgatggctgtgcatttgttgaagttcttgttgcaagagatgataataatttt
gaggtcttgctgccagcttcatccttcatgtctctacttcaatccaggaatggcacagac
atgaacagagtgcgcatgttcacagctcaccacttgaataagaatatttccagccaaaaa
tggaacactgtgaagctggtatgcactcagcctttcaacaaaatgaatgcttttggacta
acatttgtgactctcactacagatgaacagcaacctgaacagaagcctgctcctcagcag
gacagtacttcccatggaatacttcagttaaaagaagctgtttgtgatgaaactgggact
tccaaatcaagcataaacattggcagctttttcgctaaaaggaagaagctcgaatctgat
gcaactgataataaattcaattgtaaagactctcaagaagccattcctctttccaagaag
gctagaagcgaagaaagcaaaggctctttgtccaggcaatctacttctactctacgaaat
ccagtaaaaattaatagagctcctgagaagaacagtttgagtcattcttctcctgctgca
actacaagggcacccaattcttcagagaaacagaacccttctgttcatgataaagcatct
agtcgaactgttgcaagtccaagtgttgccaaaatgaaacctactacaacttcatctcaa
tctcctgcaagtgataaagagtacaaggcacgtcaacctacgcatcttgacactccttcc
tcatctgatgtaccgtttagatcaattttacgaggagttatatacacaatgagtggatat
aaaaacccccaacgctcgaagctgcgagataaaatggctgacatgggagcatcatacagg
cctgactggactgatgactgcacacacctcatatgtgccttcactaacacgccaaagtat
cgagctgtgaggggcaaagggcacatagtcacacaccgatggattgaagaatgtgcgctc
ttcaaaaagaagatgccactgaaaaaatatttacttgatcctgaggatgaagactgcctc
aactcaagcagtgtccgtgacacaagttcatctcctaagactaaggcctccccgagtccc
cctaactctgccgacccaagtccgacgcccctctctgtagccaagcaatcttctgcagtc
aggactgctgcctctcctactgaagagtctgcagattcaacacaaagcaatcgtcacgaa
gataccctcactgagccagagaatttggaggacggcagcctgcacggagatgcatcagat
gaagaagacactgatgatgaaattcaaagagcaatgggtggacgcagtgcaacgaaaaat
ggtcagtcagcagcgtcatccgactgtcctaatgacgtccttggtcgtgagacttcgtcg
catgtgaaatgcaacagctcttcaccgagtgggaaagaagtaacgtacgagaagaatggt
tcttcgtctcccattgacgcatattctgctgacactgatgaagacgaaggatcttcgccc
cttcgccagcagatagacacatcgcagctggacttgcctcttctgccagatatattttcg
ggcgaacattttttcatccacagaagttgccacgatccggccgacgttaagcgctatatt
atcgcttttaacggacacgtgagcgactacatgagcagctgcgttaatttcatcgttgcg
gacgccaagtgggataaaactttcgatgaggtgacgcaggaaaaccaggaagttcggttc
gtgaagccgtcgtggatctggcgttgcgttgacgccagttcccgcgcgccccttgagcct
catctcatcaccagcaagcgatcgtaa

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