Hyalella azteca: 108676144
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Entry
108676144 CDS
T07535
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
hazt
Hyalella azteca
Pathway
hazt03013
Nucleocytoplasmic transport
hazt03015
mRNA surveillance pathway
hazt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hazt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108676144
09122 Translation
03013 Nucleocytoplasmic transport
108676144
03015 mRNA surveillance pathway
108676144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hazt03019
]
108676144
03041 Spliceosome [BR:
hazt03041
]
108676144
03009 Ribosome biogenesis [BR:
hazt03009
]
108676144
03012 Translation factors [BR:
hazt03012
]
108676144
Enzymes [BR:
hazt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108676144
Messenger RNA biogenesis [BR:
hazt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108676144
mRNA cycle factors
Stress granule specific factors
108676144
Spliceosome [BR:
hazt03041
]
Complex C
Other components
EJC/TREX
108676144
Ribosome biogenesis [BR:
hazt03009
]
Eukaryotic type
90S particles
Helicases
108676144
Translation factors [BR:
hazt03012
]
Eukaryotic type
Initiation factors
eIF-4
108676144
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
AAA
AAA_30
Cas3-like_C_2
TniB
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
108676144
NCBI-ProteinID:
XP_018019677
UniProt:
A0A8B7P0Z0
LinkDB
All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
MAETRGRRVLPEDLSNVEFETSEEVEVVPTFDNMGLKQDLIRGIYAYGFEKPSAIQQRAI
RPIVIGRDVIAQAQSGTGKTATFAIAILQALDISVRETQVLTLSPTRELAVQIQKVVLAL
GDYLNVQCHSCIGGTNLGEDIRKLDFGQHVVSGTPGRVFDMIRRRTLRTRSIKILVLDEA
DEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPVRILVKRDELTLE
GIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHG
DMPQKERDAIMKEFRSGQYRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSG
RFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaacacggggtcgccgagttttgcctgaagacctcagcaatgttgagtttgaa
acgagtgaagaagttgaagttgtccctactttcgataacatgggactgaaacaagatctc
attcgagggatttatgcctatgggtttgaaaagccttcagccatccagcagcgtgctatc
cgccccattgtgattggtcgagatgttattgctcaggctcagtcgggtactggtaagact
gctacgtttgctattgcaattcttcaggccctggacatcagtgtccgggaaactcaagtc
ctcaccctatccccaacaagagaattggctgttcagattcaaaaggttgtgctggctctt
ggagattacttgaatgttcagtgtcactcatgcattggtggcacaaacctgggagaagat
atccgcaagttggattttggtcagcatgtggtgtcaggaactcctggcagggtgtttgac
atgatccgtcgccgcactctgaggacgcgctccatcaagatattagtgctggacgaggct
gatgagatgttgaacaaaggcttcaaggagcagatctacgacgtgtaccgctacctgcca
cccgccacacaagtcgtgctcatctccgccacgttgccacatgagatccttgagatgacc
agcaagtttatgacggatcctgtcaggattttggtcaagcgtgatgaactgacgctggaa
ggcatcaaacaattctttgtggctgtggagcgcgaggagtggaagtttgatactctgtgt
gatctctacgacaccctcaccatcacgcaggctgtaatcttctgcaacacaaagcgcaag
gttgactggttaaccgagaaaatgagggaagcaaacttcacggtgtcatctatgcacggt
gacatgccgcagaaggaacgagatgccattatgaaggagttccgctcggggcagtacaga
gtcctgatcaccaccgatgtctgggctcgaggcattgacgtgcagcaggtttcactggtg
atcaactatgacctgccaaacaaccgtgagttgtacatccaccgcattggtcgctcaggc
cgtttcggacgtaagggtgtagccatcaacttcgtcaagagcgacgacatcagaattctt
cgcgacattgagcagtattactctacacagatcgacgaaatgcccatgaatgtggctgat
ttgatataa
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