Hyalella azteca: 108676165
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Entry
108676165 CDS
T07535
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
hazt
Hyalella azteca
Pathway
hazt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hazt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108676165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hazt03041
]
108676165
Spliceosome [BR:
hazt03041
]
Complex C
Other components
Step II factors
108676165
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
WDR55
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_VPS8
PQQ_2
Beta-prop_NOL10_N
Motif
Other DBs
NCBI-GeneID:
108676165
NCBI-ProteinID:
XP_018019699
UniProt:
A0A8B7P0S6
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MSSLLGLQAYGSDEDMSGDEVNEPEKSSVDQETPQHLLPLPSNSLLSKRVEIAPVAIPTN
NLDDRLHIDPLTKELSYNPRYDVLAAPVLGPELPNQSAFHKMKRNMLSGFAEAAHVSDFE
FEKERRTFTSYGYAVDPSISSDPGEGLKMVGDTAAARKSDNVSVFESKKRYTTETKRKRD
SNSDPTDIDGFKGPWAKYENEKTVMCPSEEEKIQLDEILAKRQKRGKQTDDKIEEEKTLL
HLRTASDYQGRSFLHVPQDVGVNLKSDEPPAKCFMPKKLIHTWKGHNKGVSAIRWFPKSA
HLLLSCSMDTKVKIWEVYNERRCIRTYMGHKQAVRDVSFDNDGKRFLSCGYDRYIKLWDT
ETGECISRFTNRKVPYCVKFHPDEDKQDLFVAGTSDKKIVCWDIRTGEIVQEYDRHLGAV
NTITFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIADPTMHSMPAVTQSPNKKWLACQSM
DNKIVIFSSLDRFKLNRKKTFTGHMVAGYACNLDFSPDMSYLISGDADGRAYVWDWKTTK
LYQKWKAHDDVCIGILWHPHETSKIATAGWDGLIKYWD
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcactgctaggcttgcaggcttatggtagtgatgaggacatgagtggagatgag
gttaatgaacctgaaaaatcatcagttgatcaagagacacctcagcacctattgcctcta
cccagtaactctcttctcagtaaaagagtagaaatagcacccgttgcaatacctactaat
aatttggatgaccggctgcacatagaccctctgaccaaagagctctcctacaatcctcgg
tacgatgtcctggccgcccctgtgcttggtcctgagctgcctaatcaatctgccttccac
aagatgaagcgcaacatgctttctggctttgctgaggctgctcatgtctctgattttgag
tttgagaaagaacgaaggaccttcacttcttatggttatgctgtggatccttccatatca
agtgatcctggagaagggctgaagatggtcggcgacacagcagctgctcgcaagtctgac
aatgtttctgtgtttgaatccaaaaagcgatataccactgaaacaaagaggaagagagat
tcaaattctgaccccacagacattgatggcttcaaaggaccttgggccaagtatgaaaac
gaaaaaacagtgatgtgcccaagcgaggaggagaaaattcaacttgatgaaattctagcc
aaacgtcagaagcgcggcaagcagactgatgataaaatcgaggaagaaaagactttactt
catctcagaactgcctctgattatcaaggacggtcatttttgcatgtgcctcaagatgtt
ggagtcaatctcaagtcagacgaacctcctgccaaatgcttcatgcccaagaagcttatc
catacgtggaagggacataataaaggtgtttccgccatccgatggttccctaaatctgct
catcttctcttgtcgtgctctatggatacgaaagtcaagatatgggaagtttacaacgag
agaaggtgcatccgcacctacatgggtcacaagcaagccgtgcgagacgtctctttcgac
aacgatggcaagaggttcctgtcatgtgggtatgatcgctacattaaactgtgggacact
gagactggcgaatgtatttcacgttttacaaacagaaaagttccgtattgcgtcaagttt
catccggatgaagacaagcaagacttgtttgttgctggaacttcagacaagaaaattgtt
tgttgggatataagaacgggggaaatagttcaggagtacgaccgtcatcttggtgcggta
aacaccatcacatttgttgatgaaaatcgtcgtttcgtatccacttcagacgacaaaagt
ttgagagtgtgggagtgggatattccagtcgacttcaaatacattgcagatcccacgatg
cactccatgcccgcagtaacgcagagccccaacaagaagtggctcgcgtgtcagagcatg
gacaacaaaatcgtaatattctcgtcgctggatcgcttcaaactgaaccgcaagaagacg
ttcacgggtcacatggtcgctgggtatgcctgcaacctggacttctctcccgacatgagc
tacctcatctcaggagacgccgacggccgagcttacgtgtgggactggaagaccacgaag
ctgtaccagaagtggaaggcacatgacgatgtctgtatcggcatcttgtggcatcctcac
gagacgagcaaaatcgccacagctggttgggacggtctcatcaagtactgggattaa
DBGET
integrated database retrieval system