Hyalella azteca: 108676291 Help Entry 108676291         CDS       T07535                                  Name (RefSeq) spliceosome RNA helicase DDX39B   KO K12812   ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] Organism hazt  Hyalella azteca Pathway hazt03013   Nucleocytoplasmic transport hazt03015   mRNA surveillance pathway hazt03040   Spliceosome Brite KEGG Orthology (KO) [BR:hazt00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     108676291   09122 Translation    03013 Nucleocytoplasmic transport     108676291    03015 mRNA surveillance pathway     108676291  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:hazt03019]     108676291    03041 Spliceosome [BR:hazt03041]     108676291 Enzymes [BR:hazt01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.7  DEAD-box RNA helicase      108676291 Messenger RNA biogenesis [BR:hazt03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     EJC complex      108676291 Spliceosome [BR:hazt03041]  Complex C   Other components    EJC/TREX     108676291  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     108676291 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DEAD Helicase_C ResIII CMS1 Cas3-like_C_2 P-loop_SecA Motif Other DBs NCBI-GeneID:  108676291 NCBI-ProteinID:  XP_018019841 UniProt:  A0A8B7P462 LinkDB All DBs Position Unknown AA seq 431 aa AA seqDB search MAEQESELLDYEEEEDAVEAGAGEAAAADGEAAPAKKDVKGTYVSVHSSGFRDFLLKPEI LKAIVDCGFEHPSEVQHECIPQAVLGMDILGQAKSGMGKTAVFVLATLQQIDPVDGQVSA LVMCHTRELAYQIAKEYERFSKYMSNVKVGVFFGGMNISKDEETLKNNCPHIVVGTPGRI LALVRTKKLNLKHLKHFVLDECDKMLEQLDMRRDVQEIFRNTPHEKQVMMFSATLSKEVR AVCKKFMLDPMEVYVDDEAKLTLHGLQQHYVKIKENEKNRKLFELLDALEFNQVVIFVKS VQRCMALAQLLVDQNFPAIAIHRAMTQEERLSRYQQFKDFQKRILVATNLFGRGMDIERV NIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVTFVSEEKDAKTLNEVQERFDVSITELPD EMDLSSYIEGR NT seq 1296 nt NT seq  +upstreamnt  +downstreamnt atggctgaacaagaatctgaacttctcgactacgaagaggaggaggatgccgtggaggca ggagccggtgaggccgcagcagctgatggagaagctgctccagccaagaaagacgttaaa ggcacctatgtgtcagtccactcttctggtttcagggatttcttgctgaaacctgaaatt ctgaaggctattgtggattgcggttttgagcatccttctgaagtgcaacacgagtgcatc cctcaggctgtacttggtatggacatccttggtcaggccaagtctggtatgggcaagaca gccgtgtttgttctggcaactctccaacagattgacccagttgacggacaggtatcagct ttggtcatgtgccacacccgagaacttgcataccaaattgccaaggagtacgaacgtttc agcaagtacatgagcaacgttaaagtcggtgtgttctttggtggcatgaacatctcaaag gatgaagagaccctcaagaacaactgccctcacatcgtcgtcggcactcccggccgtatc cttgccctcgtcaggaccaagaagctcaatctaaagcacctgaagcactttgtgcttgac gagtgcgacaaaatgctggaacaattggacatgcgtcgtgacgtacaagaaattttccgc aacacccctcacgaaaaacaagtgatgatgttcagcgccactctcagcaaagaagttcgg gctgtttgcaagaaattcatgctcgatcccatggaggtgtacgtcgacgatgaggctaag cttactctgcacggtctccagcaacactacgtcaaaattaaggaaaatgagaagaacagg aagcttttcgagctcctcgatgctctggagttcaatcaggtggtgatcttcgttaagagt gtccagcgctgcatggctcttgctcagctcctcgtggaccaaaacttcccagccattgcc attcacagggccatgacccaggaagaacgcctgtctcgctatcagcagttcaaggacttc caaaagcgtatattggttgccacgaatctattcggccgtggcatggatattgagcgagta aacatcgtcttcaactacgatatgcctgaagattccgacacatacctgcatcgcgtcgcc cgcgccggacgcttcggtacaaaaggcctggccgtgacattcgtaagtgaagagaaggat gccaagaccctgaatgaagtgcaagaacggtttgatgtgagcatcactgaattaccagac gagatggacttgtcttcttacatcgagggccgttaa

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