Hyalella azteca: 108676681
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Entry
108676681 CDS
T07535
Name
(RefSeq) uncharacterized protein LOC108676681
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
hazt
Hyalella azteca
Brite
KEGG Orthology (KO) [BR:
hazt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hazt03019
]
108676681
Messenger RNA biogenesis [BR:
hazt03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
108676681
3'-5' decay
Other 3'-5' decay factors
108676681
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
PAM2
AAA_22
PhoH
ResIII
Mov-10_helical
AAA_5
Helicase_RecD
STALD
AAA_16
TFIIA
Motif
Other DBs
NCBI-GeneID:
108676681
NCBI-ProteinID:
XP_018020289
UniProt:
A0A8B7P2F1
LinkDB
All DBs
Position
Unknown
AA seq
2012 aa
AA seq
DB search
MMNKASKNSTSKSKPKAKKKRDGCEVDSNGVTEEALRHPAKNSHGGSKALPSALKILSKG
LPNGVIGPTGGNQITSSQHNIPDGKLKNDVEKVSSKVINASENGSKEKSAVSIDAKHSFS
CSYCCISFPTQSELLLHCRTQEHQATIMSDDGHDWQHRPPPRGLTNAEFKLCSSVGQGWP
VRCRLGEQCIGAHSEAELAEWQQRFEYRALKLQEAREKHLHGASYSDQLLDRLSNAQHQH
TIVTDETQGIVAVHPTATLCVSEKTSSHIWELMVSNGCPLSVVALLHDTNRSHFSLASVA
RVTLDNNGKVISKRSNSNTGFVEVTTDGEIGYQEWCNPNLQEEQLESSNESKLVYQVCVK
FQTDIYGTFRQTVILDLGKEPVLLQRLCADVIPVNEMQKLEKTKNVVISQAQRWCKENAT
IIRSFDDPSAVADKDPAYNDLDNEVLALYPPPTNMNFVISQSTLDKAVTKENYRSRFHDL
LYMEEIAQFELMRRFNIKMSILATRSYILMPSTSSMAKYAPPGELFARLELSSDISEDSP
HGRLILTNCNSILIAAVQDEQNNSADGTKPKRVVFEAIIEDKTKKEIYVKLNQRVVEELQ
LVPEEEVTLEVQFQLNRLPLAEMHFAVDRIHQLGLLFLDPDVQTVIPQPSKADLEAQFAD
TRLNPKQREAVIAMTAPVLVPLPPILLIGPFGTGKTYTLAQALKQIVQQQGTRVLICTHS
NSASDLYIREYLHPFVKSGLTEAKPLRIYYRHRWVATVHSDVQKYCLIEMENGMRRFVMP
TQEQVLQHRVVVTTLNTSRCLFDLGLDRGSFTHILVDEAAQAMECEAITPLVLAGPNTRV
VLAGDYMQLSPEVFSPFCEEKGLGLSLLERLYDHYPADHPCKILLLENYRSHPAIIKYTS
DLFYEGRLQASGNLTPHPKFKPLTFFTAKGEDVQDTSSTAFHNNSEVYEVCERISEIIKS
WPKDWGPVNDTSIGVVTPYIDQVVRIRTELRRRRLHKVCVERVLNVQGKQFRVVVLSTVR
TRHTCSNGDAGLDFGFLSNAKLLTTAITRAQSLVAVVGDPMSLVSVGKCRKLWETFVYAC
YESGSLYGTTWAALRAQLDGVELKKTFELNPLAPEFVPRFLRVAATEGVEAAAHAVAAAV
AAAAAAANSSSQRPMQVTENVQFQPQQQTQQQQSSIHLPQQQQQQLQMMPLQASTVILGT
AATTAKGGAVFPNFGGYNTVVSPSYFAPTTATALPSSIAAATVTPPFFVNAPPPQQQRAP
PRPPPPTATPLPPHLLRLYKPPYPSDQLPPMYTPPPPLPSYNLMTAPPLPPSWQASAVTS
SSTVPPPRALAVALPSVVVAASAKAPPFLPPPPTAQIITANAAANLGMGASQQQQLLQLQ
QLQLQQQQQQLLRQSNLLSQQQQQQSTVLDLQRQQQQLQQQQQMAVACTSAAVLSLQKQQ
NSIDKSNALSSLNSSNGLQFLNNIHFPENDSVDGSNILDASVTSGAGITVGDQSVTSVHN
SWASKDQQQIQQQLLLQQQLQQRQLQLQQQQQQQLSFSRLGLSDGLSDTPFTGTETSRIS
IADNKADAWRSVNSITANAGSDASLMSRNGLNSAFSSQMTPGKNDAIPNIASAGKMLTVQ
EVEMNQKFLQPRFLLQQQQLQQQNLGLSDTSVLPSSDGINSSRLPSSRPLSMTSNISASL
GGGELLSQHHMNNSSLSSSSRLGGSAFSLVNTTMTDRSASPPPGFSGLSIQNSLNQLRVS
DGIQAWQQQESGSRGVATNLPLYLRRGTKDRSHEDLINSASLSGVQTQREDNRHSMIPDL
SGSSGSNYLLNTKSSFLPLSSQQSSPLPNSSISASLLANSRSNLGNSSGFSQSFGQLGDI
SSGSNLRMNSSVINSSNTSNSLFGNHSGVSDSRSLFSSGVGSLGGDSGLFGSSASGLVRS
SLSSTSDGWSKGSNVTGPSATSSADLPRPADPLSSLNSLSHLGVMFGGYAGATPSRADVT
TPANTSTDEKTYAGVLRLALQQQANDRTSNTS
NT seq
6039 nt
NT seq
+upstream
nt +downstream
nt
atgatgaataaagccagcaaaaattcaacatcaaaaagtaaacctaaagctaagaaaaag
cgagatggctgtgaagttgatagtaatggcgtcacagaggaagctctgcgccaccctgca
aaaaactctcatggtggcagtaaggcattgccttctgcgcttaaaatcctatcaaaagga
ctgcccaatggtgttattggaccaacaggaggcaaccaaattacatcatcccagcacaat
attccagatggtaaattgaagaatgatgttgaaaaagtgtcatctaaggtgatcaatgct
agtgaaaatggcagtaaagagaaatctgcagtcagcattgatgctaagcattcgttttca
tgctcatattgctgcatcagttttcctactcagagtgaattgcttcttcattgccgaact
caagaacatcaggccaccatcatgtctgatgatggacatgactggcagcaccgaccacct
cctcgaggcctcacaaatgctgaattcaagctttgttcaagcgttggccaaggttggcca
gtacgctgcaggctgggagaacagtgcattggggcgcatagtgaggcagagctggcggag
tggcagcagaggtttgagtatcgagcactgaaactgcaggaggcaagagaaaagcatcta
catggagcttcttattcagaccaactcctagataggctcagcaatgcccagcaccaacac
accattgtcactgatgagacccagggaattgttgctgttcatccgactgccacactttgt
gtgtctgagaagacatcttctcacatttgggaacttatggtttcaaatggatgccctctc
tcagtagttgcactactccatgacactaatagaagccatttctcattagcgtctgttgct
agagtgactctcgacaacaatggtaaagtgatcagtaaacgaagcaattcaaacactggt
tttgttgaagtaacaactgatggagaaattggttatcaagaatggtgcaatcctaacctt
caagaagagcaacttgaatcatcaaatgaatcaaagcttgtgtaccaagtgtgtgtcaag
tttcagactgacatctatggaacctttagacaaacagttatccttgatttaggaaaagaa
cctgttctattgcaacgactttgtgctgacgttattcccgtgaatgaaatgcaaaagctt
gagaagacaaagaatgttgtcatcagtcaagctcagaggtggtgtaaagaaaatgccacc
ataatacgatcttttgatgacccctcggctgttgctgacaaggatcctgcctacaatgac
cttgataatgaagttcttgctctctaccctcctcctacaaacatgaactttgtcatctca
caatctactttagataaagctgtaacaaaagaaaattatcgctcaaggtttcatgaccta
ctctacatggaagaaattgcacagtttgaactcatgcgccgcttcaacatcaaaatgagt
atcttggccacccgcagctacatcctcatgccttcaacttcttcaatggctaaatatgcc
cctcctggagagctgtttgcgcgtcttgagttgtcatctgacatctcagaagattcccct
catggccgcctcatcctgacaaactgcaactctattctcatagctgcagttcaagatgaa
caaaataactctgctgatggcactaaaccaaagcgggttgtctttgaggccatcattgaa
gacaaaaccaagaaggagatctacgtgaagctgaaccagcgcgttgtggaggaattgcaa
ctcgtaccagaggaagaagtgacactggaagttcagtttcagctcaacaggctgcccctt
gctgagatgcactttgctgtagacagaatacatcagcttgggctgctcttcctcgatcct
gatgtgcaaactgttattcctcagccatccaaggcagacttggaggctcagtttgccgac
actcgactcaaccctaagcagcgggaggctgtcatcgccatgaccgctcctgtgctcgta
cccctacctcccatcttgcttattggcccatttggcactggcaagacgtacaccctggcg
caggcattgaagcaaattgtgcagcaacagggaactagagtcctcatctgtacgcattct
aatagtgcctctgatctgtacatacgagaatatcttcacccgttcgtcaaaagtggcctg
actgaagctaagcctcttcgcatatactaccgccacagatgggttgcaactgtacacagt
gatgttcaaaagtactgcctgattgagatggagaacggcatgcggcggtttgtgatgcct
acgcaggagcaggtgctgcaacaccgcgtggtcgtcactaccctcaacacctcgcgatgt
ctcttcgatctcgggctagacagaggctctttcacccacattctggtggacgaggcagca
caagcgatggagtgcgaggcgatcacgcccctggtgctggcgggccccaacacccgcgtg
gtgctcgccggggactacatgcagctcagccctgaggtgttctccccgttctgtgaggag
aagggcctcggcttgtctcttcttgaacggctctacgaccactaccctgccgaccacccc
tgcaagatactccttctggagaactatcgatctcatcctgctatcattaagtacacctcg
gacctgttctacgaggggcgtctacaggcgagcggaaacctcaccccacatcccaagttc
aagcccctcactttcttcacggccaagggcgaggatgtccaggacacatcatctacggcc
tttcataacaacagcgaggtgtacgaagtgtgtgagcgcatcagtgagatcatcaagagc
tggcccaaggactggggtcccgtgaacgacaccagcatcggcgtagtgacgccctacatc
gaccaggtcgtgcgcatccgaactgaactgcggcgcaggaggctgcataaagtctgcgtg
gaacgtgtcctgaacgtgcagggcaagcagttccgagtggttgtgttgtcaaccgtgcgc
acgcggcacacgtgttcgaacggtgacgctggcctcgacttcggctttctgtcgaacgcg
aagctcctgaccacagccatcacgcgcgcccagagtctagtggccgtcgtgggggaccct
atgtctttggtgtccgttggcaaatgcaggaaattatgggagacatttgtttacgcgtgc
tacgaaagtgggtccctgtacggcacaacctgggcagctcttcgggctcagttggatggc
gttgagctcaaaaaaactttcgaacttaacccactagctcccgaattcgtgcctcgcttc
ttgcgcgtggctgctactgaaggcgtagaagctgctgctcatgctgtggctgctgccgtt
gctgctgctgccgctgctgctaattcatcttctcagcgaccgatgcaggtgacggaaaat
gtgcagtttcagccacagcaacagacgcaacaacagcaatcatccatccacctaccacag
cagcaacaacaacagctacagatgatgccccttcaagcatcaacggtgatcctgggaaca
gctgccactactgcaaaaggtggcgctgtctttcccaactttggaggttacaatactgtc
gtctcaccatcttactttgcgcccacgactgctactgctctcccctcttccatcgcagcc
gccactgtcaccccgcctttcttcgttaacgcgcctcctccccagcaacaacgagctcct
cctcgtcctcctcctcccactgccacgcctctgcctccacatctcctgcgtttgtacaag
cccccttatccgtccgaccagctgcctcctatgtacacgccgccgcctcccctgccgtcg
tacaacctcatgacggccccgccactgcccccctcctggcaggcatcggccgttacctcc
agctccacagtccccccacctcgagccttggcggttgcccttccttcagtagtggtcgct
gcgtcggcgaaagcaccgccgttcttacctcctccaccaaccgcgcagataatcactgcc
aacgctgctgccaaccttggcatgggggcatcgcagcagcaacagttgttgcagctacag
cagttgcagctccaacagcagcagcaacaactgttgcggcaatctaacttattgtcacag
cagcaacagcaacaatcgacagtgctagacttgcagcgccagcagcagcagctgcagcag
caacagcagatggcagtagcctgtacttctgctgctgtcctgagcttacaaaagcaacaa
aattccattgataagtccaacgcattgagctcacttaattcaagcaacggtttacagttc
ttgaacaacatccatttcccagaaaacgacagtgttgatggatcaaacatcttggacgct
agcgttacttctggcgcaggcattactgttggagatcagagcgtgacttccgttcataac
tcctgggcttctaaagatcagcagcagattcaacagcaactgcttttgcaacagcaactg
cagcaacgccagctgcagctgcaacaacaacaacaacaacaattgtcgttcagcagatta
ggattgtcagatgggctttcagacactcccttcaccggcacagaaacgtcaagaatatcc
atagctgacaacaaagctgacgcttggcgctctgtaaactctattactgcgaacgctggc
agtgacgccagcctgatgtcgaggaacggtcttaattctgctttctccagtcaaatgacg
cctggtaaaaatgacgccatccccaacatagctagtgctggtaagatgctcactgttcag
gaagttgagatgaaccagaaattccttcagccacgcttcctgttgcaacagcagcaactc
cagcagcagaacctgggcctgtcggacacgtctgtgctccccagcagcgatggtatcaac
agttctaggttaccttcatctcgtcccttgagtatgacatcaaatatcagtgctagcctt
ggtgggggcgagttgttatcgcaacatcacatgaataactcatcattgtcaagcagcagt
cgcctcggtggaagcgcgttttctttagtcaatacaaccatgaccgatcgaagtgcgtct
ccacctcctggcttcagcggtctctctattcaaaattccttgaaccaacttcgggtttct
gatggaattcaagcatggcaacaacaagaatcaggctctcgtggggtggccactaatctg
ccgctttacttgagacgcggcaccaaagatcggtctcatgaagatctgatcaattccgcg
tctttgtctggagtacagacgcagagagaagacaacaggcactcgatgatcccagattta
tctggcagcagtggaagcaattacttgctgaatacaaagagttcgttccttcccctctct
tctcaacagtcaagcccgttaccgaattcgtccatttcggcttcactcctggccaactca
cgatctaatttaggtaactcttctggcttcagtcaaagttttggacaactgggcgacatt
tccagcggcagcaacttacgcatgaactcgtcagtaattaacagttctaatacaagcaac
tctctattcggaaatcattcaggcgttagcgatagtcgcagcctgttcagcagtggagtt
ggcagcctcggaggtgacagcggactctttggtagcagcgccagcggcttggttcggtcg
tctttgagcagcacaagcgacggctggagcaaaggcagcaacgtaactggtccttcagca
acttcttccgccgacctgccgagacctgctgacccacttagcagcctcaattctctgagt
cacttgggcgtcatgttcggcggttacgcaggagcaacgccttctagagctgacgtaact
actcccgccaacacctcgaccgacgagaaaacttatgcgggtgtcttaaggttagctctg
caacagcaggcgaacgacaggacctcaaacacaagctaa
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