| Entry |
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| Name |
(RefSeq) LOW QUALITY PROTEIN: general transcription and DNA repair factor IIH helicase subunit XPD-like
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| KO |
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| Organism |
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:hazt00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108677108
09124 Replication and repair
03420 Nucleotide excision repair
108677108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:hazt03021]
108677108
03036 Chromosome and associated proteins [BR:hazt03036]
108677108
03400 DNA repair and recombination proteins [BR:hazt03400]
108677108
Enzymes [BR:hazt01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
108677108
Transcription machinery [BR:hazt03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
108677108
Chromosome and associated proteins [BR:hazt03036]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108677108
DNA repair and recombination proteins [BR:hazt03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
108677108
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
756 aa
MRLDVDGLEVLFPYEFIYPEQYSYMLDLKRALDAKGHCLLEMPSGTGKTITLLALIVSYL
RGNPHNLSKLVYCSRTIPEIEKVIEELRNLLKYIEESTGKPPNITGLALASRRNLCIHPE
VSKARDGKVVDSGCYALTASYVRTRAQRDESIGRCDFFEEFDLHGREFPIPSGCYNLDDL
KDFGRKKNWCPYFLARHVVNSAQIVVYSYHYLLDPKIAEIVSKEMKKETCVIFDEAHNID
NICVDSMSINLNKRVLDKAKTCINSLSEHVSRIKDSDQSRLQDEYQKLVAGLRMYNIXCD
EKLHXDIALITDNIPGTIRTADHFIQFLRRLVDYVKMRLSVSHVVHESPASLLRDIKTRA
FIDRKPLRFCSERLSSMVRTLELTDLGDISPLVSVAHFATLLATYLHGFTIIIEPYEDKA
PNVPNPTLFFRCLDSSIAIKPVFSKFQTVVITSGTLSPLDMYPKILDFNPVVQNSFTMTL
ARPCILPMIVTKGNDQVAMSSKFESREDPAVVRNYGKLLVEMATTVPDGMVCFFTSYLYL
ESVVATWYDHGIINDLQRHKLVFIETQDDAETSLALLNYTKACERGRGAILLAVARGKVS
EGVDFDHHFGRCVVMMGIPFMYTQSRILKARLEYLRDQFNIRENDFLTFDAMRHAAQCVG
RAMRGKTDYGILLFADKRFARADKRSKLPKWIQEHLADNKCNLSTEEAVQLCRPWLRQMA
QPFTREDQLGISLLTKEQISSPECIERIQKHAHQAH |
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| NT seq |
2271 nt +upstreamnt +downstreamnt
atgaggcttgatgtggatggtctggaggttctcttcccctatgaatttatatatcctgag
caatactcctacatgcttgatctcaaaagggctctagatgctaagggtcactgtttgctt
gagatgccttcagggactggtaagaccatcactctgctggctctgattgtgtcataccta
aggggcaatccacacaatttatccaaactcgtttactgttcccggaccattccagaaatt
gaaaaggtaatagaagagttgagaaatcttttgaagtatattgaagaatctactgggaag
cctccaaacatcacgggtctggccctagcatcacgcagaaatctttgtatacatcctgaa
gtgagcaaagctcgagacggcaaggtagtggacagtggatgttatgccctcactgcttca
tacgtgcgcaccagagctcagcgtgatgagagcattgggcggtgtgatttttttgaggag
tttgatcttcatggacgggagtttcccataccttctggctgctataaccttgatgatctc
aaagactttggcagaaaaaagaactggtgtccttattttcttgccagacatgttgtgaac
agtgcacagattgttgtctacagctaccactatttactggaccctaaaattgcagaaatt
gtctctaaggaaatgaagaaagaaacttgtgtaatttttgatgaagcccacaacattgac
aacatctgcgtggacagcatgagcatcaaccttaacaagcgcgtgctggataaagccaaa
acctgcatcaatagcctcagtgaacatgtctcaagaataaaagactcggaccagtcacgg
ctgcaggacgagtatcagaagctggtggctggtctgcgtatgtacaacatttaatgtgat
gagaagcttcattaagatattgctttaattacagacaacattcccgggacgatcagaacg
gcagaccacttcatccagttcctacggcgcctggtggactacgtgaagatgcggctgagc
gtgagccacgtcgtgcacgagagtcctgcctccttgctcagggacatcaagacgcgtgcc
ttcattgacaggaagccgctcaggttttgctcagagaggctgtcatcaatggtgcgtacg
ctggagctgacagacctcggcgacatcagcccgctggtgagcgtggcgcatttcgctaca
ctcctcgccacttaccttcacggcttcacgatcatcatcgagccctacgaggacaaggcg
cctaatgtacccaaccccacgctcttcttcagatgcctggactcgagcatcgccatcaag
ccggtgttcagcaagttccagaccgtggtgatcacatcaggcacgctgtctcctctcgac
atgtaccctaaaatcctggacttcaaccctgtcgtgcagaactcgttcacgatgacccta
gcccggccctgtattttgcccatgatcgtcactaaaggcaacgatcaggtggccatgtca
tcaaagttcgagagccgagaagacccagcagtggtacgcaactacggcaagcttctcgtc
gagatggccactactgtgcctgatggcatggtgtgcttcttcacgtcgtacctgtacctg
gagagcgtggtggccacgtggtacgaccacggcatcatcaacgacctgcagcgccacaaa
cttgtcttcatagagacgcaggacgacgccgagacgtcgcttgctcttctcaactacacc
aaggcatgcgaacgcggccgcggtgcaatcctgctggcggtcgctcgaggcaaagtgtca
gaaggcgttgactttgatcaccacttcgggcggtgcgtggtcatgatgggcatccctttc
atgtacacacagagccgcattcttaaagccaggctcgagtatctcagagatcaattcaac
atccgcgagaacgacttcttgacgttcgacgcgatgcgtcacgcggcgcagtgcgtgggc
cgcgccatgagaggcaagactgactacggtattttgctctttgccgacaagagattcgct
cgagcggacaagcgcagcaaattgcccaagtggatacaggagcacctcgcagacaacaag
tgcaacctctccactgaggaagctgtacagctgtgccggccttggttgcggcagatggcg
cagccgttcaccagagaggaccagctcgggatctcgctgcttaccaaagaacaaatttcg
tcccccgaatgtatagaaagaatacagaagcatgctcatcaagcccattaa |
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