Hyalella azteca: 108677599
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Entry
108677599 CDS
T07535
Name
(RefSeq) transcription factor Sox-2 isoform X1
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
hazt
Hyalella azteca
Brite
KEGG Orthology (KO) [BR:
hazt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hazt03000
]
108677599
Transcription factors [BR:
hazt03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
108677599
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
RR_TM4-6
Vir1p
Motif
Other DBs
NCBI-GeneID:
108677599
NCBI-ProteinID:
XP_018021334
UniProt:
A0A8B7P5B9
LinkDB
All DBs
Position
Unknown
AA seq
442 aa
AA seq
DB search
MLTLDPSDLKQSALHSSHLPPHSSHSLSHNHHSSITHNHSHAHNHSLSHHVTHQSLSALN
SSLTSALHSPPPSLGSVGSMSSHSPPQTHVPSSNNNNNNSTNNNNSNNNNNGTPNNTSTN
SNSKSAAANAAAERVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTESE
KRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLMKKDKYPLAPGLLPSDPSRPPVQQVTR
DMYNMTNGYMPNGDYSDYDHVVRYYSPWKDGYGYDSAAAYGSQTYPYMTGQVYGGYDMSR
GYSPTAASPPSYMNGTYSSSMYASTPSPYSMSQMASMTSVGSLGSSASHSPTPIKSETPT
LPVSSPGATMPANVPTSVHHSSAAAAAAAADYQWSQERQEQQQKAAAAAAYMSHAQYHAH
AAAVTSSHDPMSAAAPMSLAHM
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgcttacgctggatccttcagacctgaagcagagtgccttgcactcttctcacttacct
ccacactcctctcactcactgtctcacaatcaccactcgtccataactcacaatcattca
cacgctcacaaccactcattgtcacaccatgtgacgcaccagtccctctctgccctcaat
tcttccctcacatcggcattacattcgccgccaccatccctgggcagcgtaggaagtatg
agttcccactctcctcctcaaactcatgtccccagctcgaataacaacaacaataatagt
actaacaataataactctaacaataataacaacggaactcccaacaacacgtccaccaac
tcgaatagcaagagcgcggccgcgaacgctgctgcagaacgcgtcaagcgacccatgaac
gcctttatggtttggtccagagggcaaagacgtaaaatggcccaagaaaatcccaagatg
cacaattcagaaatttctaagcgccttggagcggagtggaagttattaacagagtcagaa
aaacgacctttcatcgatgaagcgaagagactgcgcgctgtgcacatgaaggaacatcca
gactacaagtacagaccgcgaaggaaaaccaagaccctgatgaagaaagacaagtacccc
ctagcccccggtctactgccctcagacccctcacgtcctcctgttcagcaagttactaga
gatatgtacaacatgaccaatggatacatgcccaacggagactactctgactatgatcac
gtggtgcggtactactcgccttggaaagacggttacggatacgacagcgcagcggcatac
ggcagccaaacctacccctacatgaccggtcaagtgtacggaggatatgacatgtcccga
ggctactcaccaaccgcagccagccctccatcctacatgaacggcacctacagtagttcc
atgtatgcatcaacaccttcaccttattcaatgtcccagatggcatcgatgacatcagtg
ggttcgctgggctcttcagcctcccactcgcccactcccatcaagtctgagactcccact
ctacccgtctcgtccccgggcgccacgatgcctgctaacgtccctacttcggtgcaccac
tcctccgctgccgctgctgccgcggcagcggactaccagtggtctcaagaacgtcaggag
caacagcaaaaggcagcagcagcggcagcctacatgagtcacgctcaatatcacgcgcac
gctgcagcggtcacatcctcccacgatcctatgagcgcggcggcgcccatgtctttagcg
cacatgtaa
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