Hyalella azteca: 108677824
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Entry
108677824 CDS
T07535
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
hazt
Hyalella azteca
Pathway
hazt03018
RNA degradation
hazt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hazt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108677824
09123 Folding, sorting and degradation
03018 RNA degradation
108677824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hazt03019
]
108677824
03041 Spliceosome [BR:
hazt03041
]
108677824
Messenger RNA biogenesis [BR:
hazt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108677824
mRNA degradation factors
5'-3' decay
Lsm complex
108677824
Spliceosome [BR:
hazt03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
108677824
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
RNR-II_ins_dom
Motif
Other DBs
NCBI-GeneID:
108677824
NCBI-ProteinID:
XP_018021601
UniProt:
A0A8B7P8U8
LinkDB
All DBs
Position
Unknown
AA seq
123 aa
AA seq
DB search
MSGNIGAVGAAKKPAGAAAAAPDQTKEKKRKETILDLSKYLDKTIKVKFFGGREASGVLK
GYDQLINLVLDNTVEYLRDPDDPYKLTEDTKERGLVVCRGTAVVLICPMDGCEAIANPFT
QAE
NT seq
372 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggaatattggagcagttggtgctgctaaaaagcctgctggagctgctgctgct
gcccctgatcagacaaaggagaagaagcgcaaagagacaattttggacctcagcaagtac
cttgacaagaccatcaaagtaaaattttttggaggcagagaagcatcaggagttcttaaa
ggctatgatcagctcatcaatttggtacttgacaatactgttgaatatctcagagatcct
gatgacccatacaagctgaccgaggacaccaaggagcgaggccttgtggtgtgtcgcggc
acggcagtggtgctcatctgtcccatggacgggtgcgaggccatagctaatccattcact
caagccgagtag
DBGET
integrated database retrieval system
