Hyalella azteca: 108678505
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Entry
108678505 CDS
T07535
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
KO
K13191
RNA-binding protein 16
Organism
hazt
Hyalella azteca
Brite
KEGG Orthology (KO) [BR:
hazt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hazt03021
]
108678505
03041 Spliceosome [BR:
hazt03041
]
108678505
Transcription machinery [BR:
hazt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
108678505
Spliceosome [BR:
hazt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108678505
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
108678505
NCBI-ProteinID:
XP_018022441
UniProt:
A0A8B7PB67
LinkDB
All DBs
Position
Unknown
AA seq
1745 aa
AA seq
DB search
MDTIKSFNMELAGMYECKPPISKAKMTAITKRAIRAIKFYKHVVQSVEKFIQKCKTEYKI
PGLYVIDSIVRQSRHQFGADKDVFAPRFAKNILVTFYYLFKCPAEGKSKVIRVLNLWQKN
HIFGEDVIQPLFDLADPNHPIQEEITQRINQKPSRPRSTQQQQELEQYKQQEHERQQQQQ
HTTGPQSPPSQPAPAPAPSIPEHTSINSNNLPASSAAAVAAVNSAAVAAVTSLDPALIAQ
IQQILMKQQPTQPQQQQQPEIPGLGGISEPPSHTPQQQQQQQALKGLQSSGSVGGGVPHS
SAAEEHVSSGLVPVINQTGDYDGRTLPPFLGVDISQPPPGYIPPSSLFGLPPPVGVPPPQ
LEPGFQGPPGPLHGGAPPQPHADVAPVPQFGQMSPREEGEHSGDDSTEEVKDGTEEWSTE
SHHRHHHHHRSSRSPSSRSKHRRRRSRSRSRSKRSRSGSRSRSRKSPSRSSRRKRSRSRD
RRERDRERERSSSEREKLDPERERERELERERERERKKRGLPPIKPNHLAVCSTTLWVGH
LSKLVHQEELSDIYGEYGDIVSIDLIPPRGCAFICMNRRQDASRALTKLRNHKIHNKAIT
MAWAPGKGVKGKEFKDYWEVEAGCSYIPYSKLTSMSTSDLDSLEEGGVIDEETVPDWLKG
RYGVSEAAPGGGPLPGFLPIGVPAGAPPSGVNAPVIPVSGAPPVSGMHVVDGGRDMPGRE
GPPPSLGPTGPRMPHNVIPPFGLPSLPPPGVGPRGLPPMMPPNMPPNMPPSLPPNMPALP
HNLPPNLPPNMPPNMPPSLPRLGVPHSMGLGPPLAMPPVSSMIGQPIMGALPPPVSMASL
SLGRPMHAPPSPDRASNSRDSDSMDVEMEDVAKDIGKEKELDENGLNDDRDGDSGDGKMS
ITQMYNKYIAEEENKMNGAEHFPGFPRGHPYPGSRPPHFYDRNGAEFGGPRGLNNGPSLG
LSNGPPGPRLHGAMAPGLRPENFVGVNVMAAASGPGFGPRAMFGAPRPMLAPPPMGVGVM
GPRPTLLHDLGPHRPLGPALPPMQRLPEGLTPQMMPGIRLMGAQSALLFAGLSGWREGPP
PMFAPSQDRAPPSAPLENDRPWEGGHPTDEPERQEMHNEAPTETRADAFDQRKLPEDAAR
ADLLSDSNVTEIESGQSRDHDRDRRSNRDSDRDRRDRRDYDRDRRDRDRSSRERFSRDRD
GVSRDRDRDRERDRYERRDRNRDRSSRDRDRSSRDRSSRDKERTSRDRGRSSKDRDRSSR
ERGRSRDKDRVRERSSRDRDNDRHRNRYGDGERDRFGRNERGFDRYDRERDRSRTDREGN
NKDSKDGTENTNSTKKSNPWTMSRWGAAEEPPPSSNSHKIHNIPEEVEIDDDDDDVIMTE
EPGSWDAWAQMAGQPSSGPNGATSPGPVDQQNNRAVSGDAPIVDAVITLSGDEEKEAETS
SDQAPVQSLDAGKSNNPEEKSREIHNEDFCEPSSDDGRIINDDSIDVVSPSCDTKVDRSA
VEAHNEFLENRLEEPCDNIGQNPQAIERHMDEFSINGVNPDPPSEANLAGSNLEASTSGE
IEPPSQALERESHDAAPSVNCSYQDKVAEELLIARNPSPEPLDESSHNADRTTENSILDP
YSVLADKSSGLVTDVSLDYEYSMTQDTSMAGDSICSRLDEPTESSTNAGQNNERVNGLNS
ESEHPFVAEESKGHKSEGHAELKAFDGTPNNVIDDQISGNDDDDDDEGGAAGEVLNVRRS
ARTRR
NT seq
5238 nt
NT seq
+upstream
nt +downstream
nt
atggataccataaagtcttttaatatggagttggctggcatgtatgaatgcaagcctcca
atctccaaagcaaagatgaccgcaattacaaaaagagctatccgggctatcaaattctac
aagcatgtggtgcaaagtgtagaaaaatttattcaaaagtgcaaaacggagtacaaaatc
cctggtctgtacgtgattgacagcatagtgcggcagtccagacaccagtttggtgcagat
aaagatgttttcgctccccgttttgccaagaatattttagtgaccttttattacctcttt
aaatgccctgctgaaggcaagagcaaagttatcagagtgctgaacttgtggcaaaaaaat
cacatcttcggcgaggatgtgatacagccattgtttgatttggctgaccccaaccatcca
atacaagaagaaataactcaaaggattaaccaaaagcccagtcgaccaagatcaacgcaa
cagcaacaggagctcgagcagtacaagcaacaggaacatgagcgccaacagcagcaacaa
cacactacaggacctcagtcacctcccagccagcctgccccagctcctgcacctagtatt
cctgaacacacaagcatcaacagcaacaacttaccagcatcatccgctgctgctgttgcg
gctgtgaacagtgcagctgttgctgccgtgacttcgctcgacccggcgctcattgcgcag
atccagcaaatactcatgaagcagcagcccactcagccacagcagcaacagcagccggag
atacctggtcttggaggtatttctgaaccgccgagtcacacaccacaacaacagcagcaa
cagcaggctttgaaaggcctccaatcctcgggttccgtcggtggtggagtgcctcacagc
tctgctgctgaggaacacgtttcttccggtcttgtgcctgttattaaccagactggtgat
tatgatggccgcaccctgcctcctttccttggcgtggacatctcacagccgccgcctggc
tacattcctccttcttccctgtttggattgccgccgccagtgggagttcctcctcctcaa
cttgaacctgggttccagggccctccaggacctctacacggcggggcgcctcctcagcct
catgcagacgtggcgcctgtgcctcagtttggccagatgagccccagggaggagggagag
cactcgggcgatgacagcactgaggaggtcaaagatggcaccgaagagtggtcaacagag
tcccaccaccgccaccatcaccaccaccgctcatcccgctccccgtcatcacgttccaag
caccgacgccgtcggtcgcgttctcggtcgcgctcgaagcggtcgaggtctgggtcgcgg
tctcgctctcgcaagtctccttctcggtcctcgcggcgcaagagatctcgttcccgtgat
cgtcgtgagcgcgatagagaacgcgagcgttctagcagtgagcgagaaaagctggaccca
gagagggagcgcgaacgcgagctggagcgcgagagagagcgtgagcgcaagaagagaggt
ctgccgcccatcaaacctaaccatctggccgtgtgctccaccaccctctgggtcggtcat
ctgtctaagctggtgcaccaagaggaactgagcgacatttatggcgagtatggcgacatc
gtctctattgatctcatcccaccgcgcggctgtgccttcatctgcatgaacagacgccag
gacgcctcccgcgccctcaccaaactccgcaaccacaagatccataacaaggcaataaca
atggcttgggcgcctggaaaaggcgttaagggcaaggaattcaaggattactgggaggtg
gaggccggctgctcctatatcccttacagtaaactgacctctatgagcacctcggacctc
gactcgctcgaggagggaggagtcattgacgaggaaactgtgccagactggcttaaaggt
cgctacggtgtcagtgaagcagctcctggaggcggtcccctgccaggcttcctgcccatc
ggtgtacccgctggcgctcccccatcaggggtgaacgcccccgtcatccccgtgtcaggt
gctccccccgtctcggggatgcacgtcgttgatggaggcagggacatgccgggcagggag
ggacctcccccttccttggggcccacgggacccaggatgccccataacgtcatcccgccc
ttcggccttcccagcctgcctccgcccggtgttgggcctcgaggactcccacccatgatg
cccccaaacatgccccccaacatgcctccttcccttcctcccaacatgccggctttgccc
cataacttgccccctaacttgccccccaacatgccccctaacatgccccccagtctcccg
aggctcggagtgcctcactccatgggtctcggtcccccgctggccatgccccccgtgtcc
agcatgatcggtcagcccatcatgggcgccctgcctccgcctgtctccatggcatcgttg
agtctgggccgccccatgcacgcacctccatcgcccgaccgcgccagcaactcccgtgac
agcgacagtatggacgtcgagatggaagatgttgctaaggacatcgggaaagaaaaggag
ttggacgagaacggattaaacgatgatcgtgatggagattctggcgatggcaagatgagc
atcactcaaatgtacaataaatatatcgccgaggaggaaaacaaaatgaatggtgcagaa
cacttccccggcttcccccgaggacatccatacccgggctctcgtccgccccacttctac
gaccgcaatggcgctgaatttggcgggcctcgaggcttgaacaacggtccttctttgggg
cttagtaatggccctcctgggccacgtcttcatggagcaatggcccctggccttaggcct
gaaaacttcgtgggtgttaatgtcatggccgccgctagtgggccaggttttggtccacgg
gcaatgttcggagctccgcgcccaatgctagcaccgcctccaatgggcgtcggagttatg
ggccctcgtcccacgctgctacacgaccttgggccacacaggcccctgggccctgctctt
cccccaatgcagaggctgcctgaaggcctcacgccccagatgatgccaggcatccgcctc
atgggtgctcagtcggcacttctctttgcaggtctgagtgggtggcgcgaaggaccgcct
ccaatgttcgctcccagccaggaccgagctcctccatcggctccacttgagaatgatcgg
ccgtgggagggcgggcatcctactgatgaacctgagcgtcaggaaatgcacaatgaagcg
cctacagaaacgcgcgctgatgctttcgaccagcgaaagttgccagaggacgccgctcga
gctgacttgttgtcggacagcaatgtgactgagatcgaaagcgggcaatctcgagatcat
gatagggaccgacgttcaaatcgagattctgatagagatcgaagagatagaagggactat
gatcgagaccgtagagatcgagatagatcatcaagagaacgtttctctcgagacagagat
ggggtatcccgagacagagaccgcgatagagaaagagataggtatgaaagaagggacagg
aacagagatcgatcgtctagagatcgagatcgttcgagtcgtgaccgctcaagccgagac
aaagaaagaacgtctcgcgacagaggacgatcgtccaaagacagagatcgatcgtcgaga
gaacgaggccgatctcgtgacaaagatagagtgcgtgaacgatcatcacgggatcgtgac
aacgatcgacaccgcaatcgctatggagacggcgagcgagatcggtttggtcgtaatgaa
cggggttttgatcgttacgaccgtgagagggaccgctcgcgtacggaccgagagggcaat
aacaaggattctaaagatggcacagaaaatacaaactccacgaaaaaaagtaatccttgg
accatgagccgttggggcgctgctgaagaaccgccgccgtcttctaactctcacaagatt
cacaatattccagaggaggtagaaattgacgacgacgatgatgacgtcattatgactgag
gagcctggtagctgggatgcatgggcccagatggctggccagccgtcgtctgggcctaat
ggcgctacaagtcctgggcccgtggaccaacaaaataatagagcggtctctggtgatgcg
cctatcgtggatgcggtcatcacgttgagtggcgacgaggagaaggaagctgaaacgtcc
agtgatcaagctcctgtccagagcttggatgctggaaagtccaataaccctgaagaaaaa
agtcgtgaaatacacaacgaagatttttgtgaacctagttctgatgatggaaggataatt
aacgatgattccattgacgtagtttctccgtcatgtgacactaaagttgatagaagtgca
gtcgaagctcataatgagtttcttgagaataggctcgaagaaccatgtgataatattggt
cagaaccctcaagcaattgagcgacatatggacgaattttccatcaatggagtgaaccct
gaccctccaagtgaagcaaatcttgcgggatctaatttagaggcgtcaacttctggtgaa
atcgaaccaccatcccaagctcttgagcgagagtctcacgatgccgcaccttctgttaac
tgcagctaccaagacaaagttgctgaggaacttcttatagctcgtaatccatcccccgag
cccctagatgaaagttcgcataacgccgaccgaactacggaaaattccattttagatcct
tattctgtgttagctgacaaatcgtccggcctcgtgaccgatgtttcgttggactacgaa
tattccatgactcaagacacttcgatggctggggactccatttgtagtcgactagatgag
cctaccgaatcttcgaccaatgctggtcagaataacgaacgtgtgaatggactgaattct
gagtctgagcatccgtttgtggcagaggaaagtaagggccataaaagtgaaggacatgcc
gagttgaaggctttcgacggcactccgaacaatgtcatagatgaccagatctcaggaaat
gatgatgatgatgacgacgagggtggtgctgctggagaggtgctgaacgtacgccgaagt
gccagaactcgtagatag
DBGET
integrated database retrieval system
