Hyalella azteca: 108679050
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Entry
108679050 CDS
T07535
Name
(RefSeq) protein PRRC2C
KO
K14323
protein CASC3
Organism
hazt
Hyalella azteca
Pathway
hazt03013
Nucleocytoplasmic transport
hazt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hazt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108679050
03015 mRNA surveillance pathway
108679050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hazt03019
]
108679050
Messenger RNA biogenesis [BR:
hazt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108679050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
108679050
NCBI-ProteinID:
XP_018023050
UniProt:
A0A8B7PAP1
LinkDB
All DBs
Position
Unknown
AA seq
1011 aa
AA seq
DB search
MSDRRRRRKPVTEGGSDESSDDSADEVIHNSHSDLGSDAEGANSEYESADEEELAPHVAD
PNNPDAKLDDDEDRKNPQYIPKRGTFYEHDDRTMPPDEEGNVLRSDLLEDTTAPKCYPGS
TLPVVSISLKASADAETSALAGSARSKKSWRGDEGKWSHDKFQEIDQAPKPREELVSVYG
YDIRSEEGAPRARRRRRYGRGPNKYTRNWEDLDAYSRPARGGAAVARGGKPMPPHPDRKD
QDFPALGEPGDAGTAHRGSKANSESRESGTEVNMNQGGLQQEAHRSPARHKGGSVVYTSQ
EYRRSRPEDRAAGEEQSTRGRGRGARSSRGRGRGSRSDRGGWKGRYPGGEEAYSQHDSRA
SDDVRVSGVRGEGNPPAAQHHYQQQPREQGKHQQSPRSAARPRNPEAGVHDSPKHVPRNE
QPTTAHPPGRQQYGGHPQQSQPQHSPQTQQQHHQPQQPGYHQPQQPQQQQQQQQAFGRGT
QKRYSSQRGVRPGNNVAAVDRNGSVSGSNNSHYTPHPHHNYYYHDNSTTPPPQPALADAG
LHHGSGLGVNGGGSGAVIYDGTSSNATAARHAPSVVPVASTQFVASAQFVRDPSAYIGAG
ALAAPAPVLTRMYTPVSVVGTAPAEIVSPVLGPASVAAAVIAPVVTAVPQAGVVARAPFI
APDAAGLIPCQFNATPQPTPPPQFPAPHPPQFPAYTSYPPPPASEGTQPQEVYRNGVMYY
NTQSQQPQRSSTTLQKRPKAAIPIVPPPEDLDGEKKDGSSPHPDDTEQYQYEPDAMGASA
LQDSLPPSDMNAKATQHRTTVVAADKRGSGHAVPTDFTFEEAENVEVVREVNPSDHCAIQ
QLQLQQQLQLEQEAVLSGGVQDPINDVIQTTTYERSTDTHAAADEMVIVDHPTGTERCDV
SLPVDGSGIVAHTADAAADKTSSVASATSELGSSSAEQTKASSVDESGNLTTEKALSEKT
AALSMADVVDTDNAKFEDSVEDLETVPCSKLTETLANEQVSDGKGKETSIS
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataggcgacgacgtaggaaaccagtcacagaaggtggctctgacgaatcatcc
gatgattcggctgatgaagtaatacacaactcccattctgatttgggaagtgatgctgag
ggagccaacagcgaatacgagagcgctgacgaggaagaattagcacctcatgttgctgat
cctaacaatcctgatgctaaactggatgatgatgaagacaggaaaaatcctcagtacatt
cccaagaggggaacattttatgagcatgatgacagaaccatgcctccagatgaagaaggc
aatgttcttagaagtgacttgctggaggacacaactgcgcctaagtgttaccctggctcg
accctgcctgtggtgtccatcagcttgaaggccagtgctgatgctgaaactagtgcattg
gctggctctgcccgctctaaaaagtcatggcgtggagatgaaggcaaatggtcgcacgac
aaattccaagaaattgaccaggcgcccaagccgcgtgaagagcttgtgtctgtgtacggt
tatgacatccgcagtgaagaaggcgctcctcgtgcccgcagacggagacgatatggtcgc
ggacctaacaagtacacccggaactgggaggacctggatgcctactcacgccctgcgcgt
ggcggtgctgctgttgctcgtggaggcaagccgatgcccccacaccctgacaggaaagat
caggacttccctgctctaggggagcccggcgacgccggtactgcacacagaggcagtaaa
gcaaactctgagtcgcgtgagagcggcactgaagtgaacatgaaccagggcggcctgcag
caggaggcccaccgcagtcctgccaggcacaagggcggctccgtggtgtacacgagccaa
gaatatcgccgctcccgtcctgaggaccgagctgctggggaggagcagagcacgcgaggc
agaggcaggggcgccaggtcttcccgagggagaggtcgaggaagcaggagtgacagaggg
gggtggaagggcagatatcctggtggggaagaagcctattcccagcatgacagtcgtgct
agtgatgacgtccgagtgtcgggtgtgcgaggtgaaggcaaccctcctgctgcccagcac
cactaccagcagcaacctcgtgaacaaggcaaacatcaacagtcgcctcgatcagccgcc
cgaccccgcaaccctgaagctggggtccatgactcgcctaaacatgtgcctcggaatgag
cagccaactaccgcccatccgccgggcagacaacaatatggtggacatccgcaacagtct
cagccacaacactcgccacaaactcagcaacagcatcatcagccacaacagcctggctat
catcagccgcaacagccacaacaacagcagcaacaacagcaggcgtttggaagaggcacc
cagaaacggtactccagccaacgaggtgttcggcccggcaacaacgtggctgcggttgac
cgcaatggctccgtgagtggtagcaacaactcgcactacacaccacacccgcaccacaac
tactactaccacgacaacagcaccacgccaccaccacagcctgctctggctgacgctgga
ttgcatcatgggtcaggacttggtgtcaacggcggaggctctggcgccgttatatatgac
gggaccagcagcaacgcgactgctgcacgccacgccccttcggtcgtccccgtcgcctcg
acgcagttcgtcgcatcggcgcagttcgtccgtgacccaagcgcttacatcggcgcaggc
gctctggccgccccggcacccgtcctcacacggatgtatactcctgttagtgtggtagga
acggcgcctgctgaaatcgtctcaccagtgctgggaccagcgtcagtagcagcagcagtg
attgctcctgtggtgacagcggtgccgcaagccggtgtcgtggcgcgagctcccttcatc
gcgccagacgctgcaggtctcatcccatgccagttcaacgccacgccgcagcccacaccg
ccaccgcagttccctgctccacaccctccgcagttcccggcgtatacgtcctacccacca
ccgcctgctagtgaagggacccagcctcaggaagtataccgcaatggtgtgatgtactac
aacacccaaagtcaacagcctcagcgctcaagcactacgttacaaaaacgcccaaaggca
gcgattcccatcgtacctcctcctgaagacctcgatggtgagaagaaggatggatcatct
cctcatcccgacgataccgagcaatatcaatacgaacctgatgccatgggagcaagtgca
ttgcaagactcgttaccaccaagcgatatgaatgctaaagctactcagcatcgaactact
gttgtggctgccgacaagcgcggcagtggccatgctgttccgactgattttacattcgaa
gaagcagaaaatgtcgaagttgtacgtgaagttaaccctagtgatcactgtgccatccag
caactgcaacttcagcagcagcttcaactcgaacaggaagcagttctttctggaggtgtg
caagatccgataaatgatgttattcagactactacatatgaaagaagtaccgatactcac
gccgctgctgatgagatggtcatcgttgaccatcctactggtactgaacgttgcgacgtt
tccctccctgttgatggaagtggcatcgttgcccacactgctgatgccgctgcagataaa
acttcatccgttgctagtgctacttcagaactcggcagttcaagtgcagagcagacgaaa
gcctcatcggtggatgagagcggcaacttgacgaccgagaaagccttgagtgagaaaacc
gcggctctctctatggctgatgttgttgacacggacaatgcaaagtttgaagacagcgtc
gaagatttagaaactgttccgtgttcgaagttgacagaaactctggcaaacgaacaagtt
tctgatggaaaagggaaggaaacctcgatttcttga
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