KEGG   Hyalella azteca: 108679050
Entry
108679050         CDS       T07535                                 
Name
(RefSeq) protein PRRC2C
  KO
K14323  protein CASC3
Organism
hazt  Hyalella azteca
Pathway
hazt03013  Nucleocytoplasmic transport
hazt03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:hazt00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    108679050
   03015 mRNA surveillance pathway
    108679050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hazt03019]
    108679050
Messenger RNA biogenesis [BR:hazt03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     108679050
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 108679050
NCBI-ProteinID: XP_018023050
UniProt: A0A8B7PAP1
LinkDB
Position
Unknown
AA seq 1011 aa
MSDRRRRRKPVTEGGSDESSDDSADEVIHNSHSDLGSDAEGANSEYESADEEELAPHVAD
PNNPDAKLDDDEDRKNPQYIPKRGTFYEHDDRTMPPDEEGNVLRSDLLEDTTAPKCYPGS
TLPVVSISLKASADAETSALAGSARSKKSWRGDEGKWSHDKFQEIDQAPKPREELVSVYG
YDIRSEEGAPRARRRRRYGRGPNKYTRNWEDLDAYSRPARGGAAVARGGKPMPPHPDRKD
QDFPALGEPGDAGTAHRGSKANSESRESGTEVNMNQGGLQQEAHRSPARHKGGSVVYTSQ
EYRRSRPEDRAAGEEQSTRGRGRGARSSRGRGRGSRSDRGGWKGRYPGGEEAYSQHDSRA
SDDVRVSGVRGEGNPPAAQHHYQQQPREQGKHQQSPRSAARPRNPEAGVHDSPKHVPRNE
QPTTAHPPGRQQYGGHPQQSQPQHSPQTQQQHHQPQQPGYHQPQQPQQQQQQQQAFGRGT
QKRYSSQRGVRPGNNVAAVDRNGSVSGSNNSHYTPHPHHNYYYHDNSTTPPPQPALADAG
LHHGSGLGVNGGGSGAVIYDGTSSNATAARHAPSVVPVASTQFVASAQFVRDPSAYIGAG
ALAAPAPVLTRMYTPVSVVGTAPAEIVSPVLGPASVAAAVIAPVVTAVPQAGVVARAPFI
APDAAGLIPCQFNATPQPTPPPQFPAPHPPQFPAYTSYPPPPASEGTQPQEVYRNGVMYY
NTQSQQPQRSSTTLQKRPKAAIPIVPPPEDLDGEKKDGSSPHPDDTEQYQYEPDAMGASA
LQDSLPPSDMNAKATQHRTTVVAADKRGSGHAVPTDFTFEEAENVEVVREVNPSDHCAIQ
QLQLQQQLQLEQEAVLSGGVQDPINDVIQTTTYERSTDTHAAADEMVIVDHPTGTERCDV
SLPVDGSGIVAHTADAAADKTSSVASATSELGSSSAEQTKASSVDESGNLTTEKALSEKT
AALSMADVVDTDNAKFEDSVEDLETVPCSKLTETLANEQVSDGKGKETSIS
NT seq 3036 nt   +upstreamnt  +downstreamnt
atgtctgataggcgacgacgtaggaaaccagtcacagaaggtggctctgacgaatcatcc
gatgattcggctgatgaagtaatacacaactcccattctgatttgggaagtgatgctgag
ggagccaacagcgaatacgagagcgctgacgaggaagaattagcacctcatgttgctgat
cctaacaatcctgatgctaaactggatgatgatgaagacaggaaaaatcctcagtacatt
cccaagaggggaacattttatgagcatgatgacagaaccatgcctccagatgaagaaggc
aatgttcttagaagtgacttgctggaggacacaactgcgcctaagtgttaccctggctcg
accctgcctgtggtgtccatcagcttgaaggccagtgctgatgctgaaactagtgcattg
gctggctctgcccgctctaaaaagtcatggcgtggagatgaaggcaaatggtcgcacgac
aaattccaagaaattgaccaggcgcccaagccgcgtgaagagcttgtgtctgtgtacggt
tatgacatccgcagtgaagaaggcgctcctcgtgcccgcagacggagacgatatggtcgc
ggacctaacaagtacacccggaactgggaggacctggatgcctactcacgccctgcgcgt
ggcggtgctgctgttgctcgtggaggcaagccgatgcccccacaccctgacaggaaagat
caggacttccctgctctaggggagcccggcgacgccggtactgcacacagaggcagtaaa
gcaaactctgagtcgcgtgagagcggcactgaagtgaacatgaaccagggcggcctgcag
caggaggcccaccgcagtcctgccaggcacaagggcggctccgtggtgtacacgagccaa
gaatatcgccgctcccgtcctgaggaccgagctgctggggaggagcagagcacgcgaggc
agaggcaggggcgccaggtcttcccgagggagaggtcgaggaagcaggagtgacagaggg
gggtggaagggcagatatcctggtggggaagaagcctattcccagcatgacagtcgtgct
agtgatgacgtccgagtgtcgggtgtgcgaggtgaaggcaaccctcctgctgcccagcac
cactaccagcagcaacctcgtgaacaaggcaaacatcaacagtcgcctcgatcagccgcc
cgaccccgcaaccctgaagctggggtccatgactcgcctaaacatgtgcctcggaatgag
cagccaactaccgcccatccgccgggcagacaacaatatggtggacatccgcaacagtct
cagccacaacactcgccacaaactcagcaacagcatcatcagccacaacagcctggctat
catcagccgcaacagccacaacaacagcagcaacaacagcaggcgtttggaagaggcacc
cagaaacggtactccagccaacgaggtgttcggcccggcaacaacgtggctgcggttgac
cgcaatggctccgtgagtggtagcaacaactcgcactacacaccacacccgcaccacaac
tactactaccacgacaacagcaccacgccaccaccacagcctgctctggctgacgctgga
ttgcatcatgggtcaggacttggtgtcaacggcggaggctctggcgccgttatatatgac
gggaccagcagcaacgcgactgctgcacgccacgccccttcggtcgtccccgtcgcctcg
acgcagttcgtcgcatcggcgcagttcgtccgtgacccaagcgcttacatcggcgcaggc
gctctggccgccccggcacccgtcctcacacggatgtatactcctgttagtgtggtagga
acggcgcctgctgaaatcgtctcaccagtgctgggaccagcgtcagtagcagcagcagtg
attgctcctgtggtgacagcggtgccgcaagccggtgtcgtggcgcgagctcccttcatc
gcgccagacgctgcaggtctcatcccatgccagttcaacgccacgccgcagcccacaccg
ccaccgcagttccctgctccacaccctccgcagttcccggcgtatacgtcctacccacca
ccgcctgctagtgaagggacccagcctcaggaagtataccgcaatggtgtgatgtactac
aacacccaaagtcaacagcctcagcgctcaagcactacgttacaaaaacgcccaaaggca
gcgattcccatcgtacctcctcctgaagacctcgatggtgagaagaaggatggatcatct
cctcatcccgacgataccgagcaatatcaatacgaacctgatgccatgggagcaagtgca
ttgcaagactcgttaccaccaagcgatatgaatgctaaagctactcagcatcgaactact
gttgtggctgccgacaagcgcggcagtggccatgctgttccgactgattttacattcgaa
gaagcagaaaatgtcgaagttgtacgtgaagttaaccctagtgatcactgtgccatccag
caactgcaacttcagcagcagcttcaactcgaacaggaagcagttctttctggaggtgtg
caagatccgataaatgatgttattcagactactacatatgaaagaagtaccgatactcac
gccgctgctgatgagatggtcatcgttgaccatcctactggtactgaacgttgcgacgtt
tccctccctgttgatggaagtggcatcgttgcccacactgctgatgccgctgcagataaa
acttcatccgttgctagtgctacttcagaactcggcagttcaagtgcagagcagacgaaa
gcctcatcggtggatgagagcggcaacttgacgaccgagaaagccttgagtgagaaaacc
gcggctctctctatggctgatgttgttgacacggacaatgcaaagtttgaagacagcgtc
gaagatttagaaactgttccgtgttcgaagttgacagaaactctggcaaacgaacaagtt
tctgatggaaaagggaaggaaacctcgatttcttga

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