Hyalella azteca: 108679490
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Entry
108679490 CDS
T07535
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
hazt
Hyalella azteca
Pathway
hazt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hazt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108679490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hazt03019
]
108679490
Messenger RNA biogenesis [BR:
hazt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
108679490
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
108679490
NCBI-ProteinID:
XP_018023603
UniProt:
A0A8B7PBY8
LinkDB
All DBs
Position
Unknown
AA seq
460 aa
AA seq
DB search
MTEVQDDDHWLYGEDNAEKEAASQQATSKEDNVPEGSDSADGKDAPADNSEQTQDQEKPD
ADAGASLEPNDKEALPSAGDAPAADATIGEGGKEGEDDAAGESSDEDDLTITIGELKKAA
EVMTPGQHQARFQPKAAPTTGLKDDDFATAGKVNGVAVADLNLADYEDKPWRKPGADLSD
YFNYGFNEQSWFKYCDRQKRMRMHESGSGLNSLGINVGKPFGYLSNSENKSNGAENNGNS
TSRPPRASVPFNKRVDNPARPEGNSIQVMTADRREYSNKVMPPSYMSGPPPPMPHGPYDD
MEFGGNMWEQGPDNGYYPPVSYYGTPPPAGPPAGPPVVQGPPPNFNAPPVSWNNPPPPMV
PPPQMVPPAAHVAPPPPRWGGEVPPPPSLTGGISVGHGESPPQYRTDRDRDDSDDDRKRS
RRHRRLSRSPSRPRHRTRSRSRSPSHKHKRKKSKRDRDAD
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagtgcaggacgatgaccactggttgtacggagaagataatgcagagaaagaa
gccgcttctcaacaagcaacatctaaggaggacaatgtacctgaggggagtgattcagca
gacggtaaagatgcaccagctgataattcagagcaaactcaagatcaagaaaaacctgat
gcagatgcaggagcgtcacttgagcccaatgacaaagaggccttgccttctgctggagat
gccccagcagcagatgctaccattggtgaagggggaaaagaaggtgaagacgatgctgca
ggggagagtagtgatgaagacgatctcaccatcaccattggtgaactcaagaaggcggct
gaagttatgacccctggccaacaccaggctcgcttccaacctaaggctgccccaacaaca
ggccttaaagacgatgactttgctactgctggcaaagtgaatggtgtagctgtggcagac
ttgaatttggctgactatgaagacaagccttggaggaagcctggtgcagacctctcagac
tacttcaattatggtttcaatgaacaatcttggttcaagtattgtgaccgccagaaaagg
atgaggatgcatgagagtggcagtggactgaactctttagggatcaatgttggcaagcca
tttgggtacttgtctaattcagagaacaagtcaaatggagctgagaacaacgggaactcc
accagccgcccgccacgagcgtccgtgcctttcaataaacgcgtggacaacccggcacga
cctgagggcaactccatacaggtgatgacagcagaccgtcgcgagtactccaacaaagtc
atgcctccttcctacatgtctggaccaccgcctcccatgccacatggaccctatgatgac
atggaatttggcgggaacatgtgggaacaaggccccgacaacggctattaccctccagtg
tcttactacggcacgcctcctcctgctgggcctcctgcggggcctcctgtagtgcagggc
ccgccccccaacttcaatgctcctcctgtgtcctggaataacccccctccccccatggtg
cctccaccccagatggtacctccagcagcacatgtagctccgcctcctccaaggtggggc
ggtgaagtgcctcctcctccatctctgaccgggggcatctctgtggggcacggagagtct
ccgccgcagtaccgtacagacagagaccgcgacgactctgacgacgacaggaaaaggtcg
cgtcgtcaccgccgcctgtcacggtcgccctcgcgtccccgtcaccgcacgcggtcgcgg
tcccggtcgccctcacacaaacacaagcgcaagaagagcaagcgggacagggacgccgac
tag
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