Hyalella azteca: 108679738
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Entry
108679738 CDS
T07535
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
hazt
Hyalella azteca
Pathway
hazt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hazt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108679738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hazt03041
]
108679738
Enzymes [BR:
hazt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108679738
Spliceosome [BR:
hazt03041
]
Complex C
Other components
Step II factors
108679738
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
AAA_19
nSTAND3
T2SSE
AAA_30
ATPase
Flavi_DEAD
AAA_23
cobW
ResIII
AAA_16
AAA_7
ABC_tran
Motif
Other DBs
NCBI-GeneID:
108679738
NCBI-ProteinID:
XP_018023941
UniProt:
A0A6A0H8N0
LinkDB
All DBs
Position
Unknown
AA seq
1290 aa
AA seq
DB search
MANILEGSSGGPGGLIIRNSGQQASKPKQKQSLLGLDKLAALKRKIKDDEEKLKARHDSS
SSSSSDNDEETAVKRYKRGDVQAISKSSSQGTDKARISSKNFRGKYDETPSYTGGVNYKA
RERITEKYRRHKDKYVRASTKVNSRGSTSDNDDRHQSSRVGSSNKSVSRGDGEHTGRSER
RRNDDDRSDRRDRNDRRYRNDDGHSERRDRHEGESEASRRSDRYTSERRDWSDRYARTPR
FSEEPGTPRIYDSLSNTSWDEDECENKKLSQWDITSPMTTGRKRQDGDWSLRSTASNIRE
AFQKSKRMSGSKFFSKNGAPLSTPTYENNSWTKNEEEEEKFDPQNEREKAEWDEEEKRLD
RQWYDMDQGYDDTNNPFADVSAEYEKKKTEKIERTKKMSAKQRQIIKDNELWERNRMLTS
GVVQKLDYDEDFEEEFTNRVHILVHNIVPPFLDGRIVFTKQPEPVIPVKDSTSDMAIVAR
KGSAAVRAHREQKERRKAARKEWELAGTQLGDIMGIKKEDQTDDRKLEEKETDYRADQKF
ADHMKETSHASSEFSKKKSMSQQRKYLPAYAVREEVLRIIRENPVVIIVGETGSGKTTQL
TQYLHEDGYTKYGMVGCTQPRRVAAMSVAKRVSDEMGTELGEQVGYSIRFEDCTSESTVI
KYMTDGILLRESLREPDLDNYSAVIMDEAHERSLNTDVLFGLLREVITRRQDLRLIVTSA
TMDSGKFASFFGDVPVYIIPGRTFPVEMFFSRNVVEDYVEAAVKQALQIHLQAEEGDILV
FMPGQEDIEVTCELLVEKLEDLDDAPQLAVLPIYSQLPSDLQAKIFQKAPDGLRKCVVAT
NIAETSLTVDGIKYVVDCGYCKLKVFNPRVGMDGLQVYPVSQANANQRMGRAGRTGPGMC
YRLYTERQFKDELLPTTVPEIQRTNLANVVLLLKSLGVEDLMAFHFMDPPPQDNLLNSQY
QLWTLGALDNTGGLTPLGRAMVEFPLDPALSKMLLAGVDMGCSDDILTIVSMLSVPAIFY
RPKGREEEADAMREKFQVPESDHLTYLNIYRQWKLQKYSMNWCNKHFLHFKALKKVREVR
MQLKEIMDQQKFNVVSAGNDEDLIRKCICTAYFHQACRLKGIGEYVNLRTGTPCHLHPTS
ALFGMGYTPDYIVYHELIMTSREFMQCVTAVEGGWLAEVGAKFFSINEGGASRAQRKRCA
VEHKHAMENEMSRAQLAIKEREEQKVRDMLSSRRQQIYDVGTPRLQHLKKTATRQEPASD
RSTSSRSNARAAVVTPRHTAISEDDDEEGE
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atggctaatatcctggagggctcaagtggtggacccggggggctcatcatccggaacagt
ggtcaacaggcatccaaacccaaacagaaacaatctctacttggtttagacaaactggcc
gcactcaagaggaagattaaagacgacgaagagaaattgaaagctcgccatgactccagc
agttcaagttcctctgataatgatgaagaaactgcagttaagcgttacaaacgaggtgat
gtacaagccatcagcaagtcaagctctcagggtacagataaagcaagaatttcttcaaaa
aattttcgcggcaagtatgatgaaactccttcgtacacaggtggtgtaaactataaggct
agggaacgaatcacagagaaatatcgtcgccacaaagacaaatacgttcgtgcatcaacc
aaggtcaattctcgaggaagtacatctgataacgacgaccgacatcaaagtagccgagtg
ggttccagtaataagagtgtttctagaggtgatggcgagcatacaggacgaagcgagagg
cgcagaaatgacgatgatcgcagcgacaggcgtgatcgaaatgacagacgttatcgtaac
gatgatggtcatagtgagaggcgcgatcgacacgaaggtgagagtgaggcatcgagacga
tctgatcgttacacctcggaacgccgcgattggtctgatcgatatgcaagaactccaaga
ttttcagaggagcctggaacgccgaggatatatgacagtttatccaacacttcttgggat
gaggacgagtgtgagaacaagaagctttcgcagtgggatattaccagtcctatgacaact
ggcaggaaaaggcaagacggagactggtcacttcgcagcacggcatcaaacatcagagaa
gcgtttcaaaagtctaaacggatgagcggcagtaaattcttctctaaaaatggcgctcca
ctttcaacaccaacttacgaaaacaattcttggactaaaaacgaagaggaggaagaaaag
tttgatccacaaaacgagagagaaaaagccgaatgggatgaagaagagaagaggcttgac
agacagtggtatgacatggatcagggctatgatgataccaacaaccctttcgctgatgtc
tcagctgaatatgaaaagaagaaaaccgagaaaattgaaagaactaaaaaaatgagtgcc
aaacagaggcagatcatcaaagataatgaactgtgggagcgcaacagaatgctcaccagt
ggagtagtgcagaaactcgactacgatgaagactttgaagaagaattcacgaaccgtgtg
catattttggttcacaacatcgtgccgccattcttggacggcagaatagttttcacgaag
cagcccgagcccgttattcccgttaaagattcgacttcagacatggctatagtagcgcgg
aagggttccgccgctgtcagggctcatcgagaacagaaagaacgacgcaaagctgcgagg
aaagaatgggaactggcgggtacacagctgggagacataatgggcatcaagaaagaagac
caaactgatgaccgaaaacttgaagaaaaagaaactgattacagagcggaccaaaaattc
gctgatcacatgaaagaaacttctcatgcctcgagtgagttttccaaaaagaaatccatg
tcacaacaaaggaaatatttgccagcttacgctgtacgtgaagaagtacttcgaatcata
cgcgaaaatcctgtagtgatcattgtaggggaaaccgggagcgggaagaccacacagctg
actcaatacttacacgaggatggctacacaaaatacggaatggtcggctgcacgcagcct
cgccgagtggctgcaatgtcggtcgcaaaacgagtttctgacgaaatgggaacagaacta
ggagagcaagttggatattctattcgtttcgaagactgtacgtcagaatcaaccgttatc
aagtacatgactgatggtatattgctccgagaatcacttagggaaccagatcttgataac
tacagcgctgtaataatggacgaggctcatgaacgctccttgaatacggacgtactcttc
ggtttgctccgcgaggtgatcaccaggagacaagatctccgcctcattgtcacttcagcc
accatggattctggtaagtttgcttcatttttcggtgatgttccagtgtacataattcct
ggccgaacatttccagtcgaaatgtttttctcaagaaatgttgtagaagattatgtagag
gccgctgtgaagcaggcgcttcagatccacctgcaggcagaagaaggcgacatccttgtt
ttcatgcctggtcaggaagacattgaggtaacctgcgagctgctcgtagaaaagctcgaa
gatttagatgatgcgcctcaactggccgtgttgcctatttactctcagttgccttctgat
ctgcaggctaaaattttccagaaagctccagatggactccggaaatgcgtggtggctact
aacatagccgagacgtccttgactgtggatggcatcaagtacgtcgttgattgtggatac
tgcaagctgaaggtattcaatcctcgagttggtatggatggtcttcaggtttaccccgtg
tctcaggcgaatgccaatcaaagaatgggtcgtgctggccgtaccggccctggcatgtgc
tacagactgtacactgaacgacagttcaaagacgaacttctgcctacaactgtcccggag
attcaacgcacaaacttagctaatgtggtgctgctgcttaaaagtctcggcgtggaggac
ctaatggctttccatttcatggatcctcctccacaagataatttactcaattctcaatac
cagctatggacattgggagctctggataatacaggtggcttgacacctctaggtcgggcc
atggtggagttccctttggacccagcgctttcaaaaatgttacttgctggcgtggacatg
ggctgctccgatgatatcctcactatagtttctatgctctcagtgcctgcgatcttctac
agaccaaaggggcgcgaggaagaggccgatgccatgagggaaaagttccaggttcctgag
tcagatcatcttacttatctcaacatatatcggcagtggaaactgcagaagtattcgatg
aactggtgcaacaagcacttcttgcatttcaaagcattgaaaaaagtccgtgaagttcga
atgcagttgaaagaaatcatggatcaacagaagttcaacgttgtgagcgctggtaacgac
gaggatctcataagaaagtgcatctgtacggcttatttccaccaagcttgtcgcctgaag
ggcattggcgagtacgtgaacctacgcactggcaccccatgtcacctacacccgacgtct
gcccttttcggcatgggctacacgccagactacatcgtgtaccacgagctcatcatgacg
agccgggagttcatgcagtgcgttacggccgtcgagggaggctggcttgcggaggtcggg
gccaagttcttcagcattaacgaaggcggtgcgtctcgagcgcagcgcaaacgatgcgca
gtggagcacaagcacgccatggagaacgagatgagcagagcccagctcgccatcaaggag
agggaagaacagaaggtgcgcgacatgttatcatcgagacgtcagcagatttatgatgtt
ggcactcctcgactgcagcacttgaagaagactgccacacggcaagaaccagcgagtgat
cggtcgacgagcagcaggagtaacgctcgtgctgcagtcgtcacacctcgtcacacggcc
ataagcgaagacgatgacgaggaaggagaatga
DBGET
integrated database retrieval system
