Hyalella azteca: 108680748
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Entry
108680748 CDS
T07535
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
hazt
Hyalella azteca
Pathway
hazt03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hazt00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108680748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hazt03021
]
108680748
03019 Messenger RNA biogenesis [BR:
hazt03019
]
108680748
Transcription machinery [BR:
hazt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
108680748
RNA polymerase I system
108680748
Messenger RNA biogenesis [BR:
hazt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
108680748
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW4_SPT5
KOW7_SPT5
KOW2_Spt5
KOW6_SPT5
Spt5-NGN
KOW5_SPT5
KOWx_SPT5
KOW
KOW1_SPT5
Spt5_N
GPKOW_C
Chondroitinas_B
Motif
Other DBs
NCBI-GeneID:
108680748
NCBI-ProteinID:
XP_018025132
UniProt:
A0A8B7PHY2
LinkDB
All DBs
Position
Unknown
AA seq
1098 aa
AA seq
DB search
MSESDGSRHSDSDHGGSDSEGERGGRGTKHSRARQYSDEAEEARSGDEEQSGDEEPADGE
DIAQSERDSEEDEEDEDRPRKKKRRNAVADYFLVEAEVDDPDGEEEDDDEVEDYDLLGNE
RDEVGVTAREIEASRRASNIWDNEKEEEIEEYYRRKYAEETSAGARFGVGGEDMSDEITQ
QTLLPGVKDPNLWMVKCRIGEEKATALQMMRKYIAYQHTEEPLQIKSLVAPEGVKGYVYI
ESFKQSHVKQAVEGVSNLRIGLWTQTMVPIQQMTDVLRVVKSVPSLKKNVWVRLRRGIFK
EDLAQVDYVDSSQNNVMLKLIPRIDYTKKRGLLKTSQGDDKRKKTPRPPQKLFDNVAIQA
IGGLVTQDGDFLVFEGNRYTRKGFLYKQFNMSAIMFEGVKPTLAELEKFEEQNLTDVELT
TASTDEESHNFAPGDNVEVVEGELVNLMGKVTRVDGARIYIKPNHEDLKDDLEFFAHELK
KYFRQGDHVKVIAGRYEGDTGLIVRVEENLIVLFSDLTMHELQVLPRDLQLCADVATGVD
SLGQFQWGDMVAIDSQTVGVIVRLEKESFQVLTMHGKIQYVRPQAVHKKKENRRAMALDS
EQNTIQINDIVKAVDGPYTGEHGEMKHLYRNYAFLYNKTQLENGGIFVCKTRHLLLAGGG
KGSSGVGGPMGGVGGLGFMSPRLTSPAHSGSASERSGGFGAGGGGGDRGGGRGRGRGRGV
GRDRGLIGVTIKITQGPYKGHVGIVKDATDCTVRVELHSKCQTIIVDRSRVAPVGSTSTR
SAGSFTASHTPQWGSQTPMYGVAGGAHTPMYGSQTPQYDGSRTPNFGSMTPSHEPGSQTP
GRQSAWDPNITNTPARSSDFDEYSYDEATPSPAYNPGGGAGGNTPGYQSDVGQGPYTPAT
PGAAYNSDNNYSPYNQPDPSPQAYQPGSSPSAYAGTPSPAGTGAYQATPSPGGSGYASPS
PLAYSPMTPGAASPYTGSTGVDSLGMQDWQSVDIEVKIRATHDDPGLSGQVGVIRSITGG
NCSVFLPEEERVVNINGEHLEPVVPVQGDRVKVIFGEDREQMGSLLSIDNNEGVVNMDHS
DLKMLQLRYLCKMSSQQQ
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaagtgatggcagccgccactctgattccgaccatggtggtagcgactctgaa
ggtgaaagaggtggtcgtggcactaaacacagcagagcccgacagtactcagatgaggct
gaggaggccagaagtggggatgaggagcagagtggtgatgaggaacctgctgatggggag
gatatagctcagtcggaacgagacagtgaggaagatgaagaagatgaagacaggcctcgg
aagaagaagcgtcgcaatgcagttgctgattatttccttgtggaagctgaagtggatgat
cctgatggtgaagaagaggacgacgatgaggttgaagactacgacttgcttggcaatgaa
cgtgacgaggtgggcgtaactgcccgtgagattgaagctagtcgccgcgccagcaacatt
tgggacaatgaaaaggaggaggagattgaggagtactacagacgcaagtatgccgaggag
acatccgccggggcccgcttcggcgtgggcggtgaagacatgagcgatgagatcacccag
caaacattgctgcctggcgtcaaagatcctaacttgtggatggttaagtgccgcattggc
gaagagaaagcaacggcgctgcagatgatgcgtaaatacattgcataccagcacaccgaa
gagcctttgcaaataaagtcgctggttgcgccggagggagtcaagggctatgtctacatc
gaatccttcaaacagagccatgtcaagcaggctgtggaaggtgtgagcaacttacgaatt
ggtctgtggacccagactatggtgcctattcagcaaatgaccgacgttctgagagtcgtg
aagtccgtaccgagcttgaaaaagaatgtttgggtacgtctccggcgtggcatcttcaag
gaagaccttgcacaagttgattatgttgactcaagccaaaacaatgtcatgttgaaactt
attccacgcattgattacacaaagaaacgtggcttgctcaagacgtcgcaaggagatgat
aaacgtaagaaaactccacgtcctccccaaaaactttttgataatgttgccattcaagcc
ataggtggattggtgacacaagatggtgacttccttgtctttgaaggtaaccgctacaca
agaaaaggttttctctacaagcagttcaacatgagtgcaatcatgtttgagggagtcaaa
ccgacactagctgagctagaaaagtttgaggagcagaatctgactgatgttgagctgaca
acggcttcaactgatgaagagtcgcataactttgctcctggcgataatgtggaggttgtt
gaaggtgagctggtcaacctcatgggcaaagtgacgcgcgtggatggagcgcgtatttac
atcaagcctaatcacgaggatcttaaagacgatcttgagttctttgctcatgagcttaag
aaatatttccggcaaggagaccatgttaaagtgattgctggtcgctatgagggagacaca
gggctaattgtacgagtggaagaaaacctcattgttttgttctctgatctgacaatgcac
gagctacaagtgctgccacgtgacctgcagctatgcgcagatgtagcaactggtgttgat
tctctgggtcagtttcagtggggtgacatggttgccattgattcccaaactgtcggcgtt
attgttcgacttgagaaagaaagtttccaagttctgacaatgcatggaaaaattcagtac
gtaaggccacaagccgtgcataagaagaaggagaacagacgagcaatggctcttgattcg
gaacagaataccatccagattaatgatattgtcaaggctgttgatggaccatacactggg
gagcacggtgaaatgaaacacctttatcgcaactatgccttcctctataataaaactcag
ctggaaaatggaggtatattcgtttgcaaaacacgtcacttgcttcttgctggaggaggg
aaaggcagcagtggtgtgggtggccccatggggggcgttggtggcctcggcttcatgtca
cctcgtctcacgtcaccagcgcactcagggtcggcatcggagcgatccggaggcttcggt
gcgggtggcggtggaggagatcgtgggggcggtcggggccgtggtcgaggtcgtggcgtt
ggtcgggatcgaggtcttattggtgtgaccatcaaaatcacacagggaccttacaaagga
catgtgggcatcgtcaaggatgctaccgactgcacagtgcgtgtggagctgcactcaaag
tgccagacaatcattgtggatcgttctcgcgttgctcccgtgggttctacgagcactcgc
tctgctggctccttcactgcatcgcatactcctcaatggggttcgcagactcccatgtac
ggggttgctggtggtgcccacactcccatgtacggctctcagacgcctcagtatgatggc
tcaaggactccaaatttcggttcgatgactccatctcacgaacctggaagtcagacgcct
ggcaggcaaagtgcatgggacccgaatatcacgaatactcctgctcggtcctccgacttc
gacgagtactcttatgatgaggcgacaccttctcctgcctacaaccctggtggtggagct
ggaggtaacactccaggataccaaagtgatgttggccaaggtccatacacaccggccact
cctggcgctgcatacaacagtgataacaactacagcccttacaaccaacccgatccttct
cctcaagcctaccagcctggctcgtctccgtctgcgtatgcaggcactccatcacccgcc
ggtactggggcttatcaagcaaccccttctcccggtgggtctggctacgcgtcgccatca
cctcttgcgtacagccccatgaccccgggggctgcatcaccctatacgggctccacaggc
gtcgacagcctaggcatgcaggactggcagagtgttgacatcgaagtcaagattcgtgcg
acgcacgatgatcccggtctcagcggacaagtgggcgtgatccgcagcatcaccggtgga
aactgctccgtatttttgcctgaagaggaacgtgtggtcaacatcaatggcgaacatttg
gagcctgtggtgcccgtgcaaggagatcgagttaaggtgatcttcggcgaagaccgtgag
cagatgggctcattgctgtccatcgacaacaacgagggcgtcgtcaacatggaccactcg
gacctgaagatgctgcagctgcgatacttgtgcaaaatgagcagtcaacaacagtaa
DBGET
integrated database retrieval system
