Hyalella azteca: 108680788
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Entry
108680788 CDS
T07535
Name
(RefSeq) DNA-binding protein SMUBP-2 isoform X1
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
hazt
Hyalella azteca
Brite
KEGG Orthology (KO) [BR:
hazt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hazt03009
]
108680788
03012 Translation factors [BR:
hazt03012
]
108680788
Enzymes [BR:
hazt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
108680788
5.6.2.5 RNA 5'-3' helicase
108680788
Ribosome biogenesis [BR:
hazt03009
]
Eukaryotic type
Other ribosome biogenesis factors
108680788
Translation factors [BR:
hazt03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
108680788
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
R3H
AAA_30
AAA_19
SMUBP-2_HCS1_1B
Viral_helicase1
ResIII
zf-AN1
AAA_22
DEAD
Flavi_DEAD
UvrD_C_2
Transp_Tc5_C
nSTAND3
AAA
AAA_16
UvrD-helicase
nSTAND_NTPase5
IstB_IS21
PhoH
RuvB_N
AAA_27
Motif
Other DBs
NCBI-GeneID:
108680788
NCBI-ProteinID:
XP_018025176
UniProt:
A0A8B7PIL2
LinkDB
All DBs
Position
Unknown
AA seq
1105 aa
AA seq
DB search
MDLKANVQDNLLMETETTTAALDDLNEKFLPSIHLQKKGDHNSTGDLEKNAMESRNIGMS
DMEMENKANNSKIFSESTQRCLQDEKKSNTESKPETFTEISVGELNKMTRYDFLRLQKKL
YLLERDAENEREVMKTVNSSGEGVPGVLSHLEVVSVTSTRFGRICITFASYAHQTLPPHG
LRKGDNVSIYSGGPMCRQEDHCRDGVVLDISNQDVHITIDEAYEFQESSSYSVKHFPSLE
NIKRILKALKCMAEVQGPSYHLSAVLFGESDPMPPLLRLPPKLTSSNSSNQLIFFNKTLD
QSQQEAVDFVVKQQDLAVVHGPPGTGKTTTLIEIIRQHVKMGLKVLALAPSNLGVDNLVE
RLDIVGIRVVRIGHPARTTPATQRHTIDALMHNYEGREIVKDIQNEINTLTRRLDFIYGK
DRHSTYKELGQLRKELNERQERMVRDLIQGADVVLCTLMSAHTSNAMRYLKKDHFGLTVI
DECSQGTEASCYLSVLRSPKLVLAGDHQQLPPTVLSPEASALLISLMERVIDLHGSKIVK
MLTVQYRMHVDIMSWSSAALYNNQLIAHESVSQHLLKDLPHVSNNEYTGVPLLLVDTSSC
PGFEESIDESITASSRSNEGEASMVLALVQKMIAAGLSPQQVAVISPYSRQVKLVRSLIQ
VDYPEVEVQTVDGFQGREKEAVILTLVRSNTKGEIGFLAEDRRLNVAVTRARRHLSVVCD
TQTLQQHSFLKTFVEYMLTNARVVRAEHMDEENCTQISADFRDLDLSDILKPQKPEVKPE
SKSEEQIAKEEFERTQIKTERIRKMLNTFIESSNKKYHFSAKLSSFERMIVHEAAQSMGL
WHYSEGLNKKRHVVVSKEPVAEAQVVAVSDVKSPLDNEVKCSRDEEAPIYNVPQSEANDL
CSEAAIVEKQAPTERLTKHCTICGKDILKENFTLHRLACEKKENEAISLRNKKVQEEKQT
SELTANKENSKSKRKKNESKMKSTSAKEVVTEEEDFDAVLSAFAASHKRCNLAGCSAASA
GSLLLQSCNYCHSWYCLQHFIAEAHGCGHHARQHARAMVVREGVIYPGSGVPSKLPSHDR
RAQLQRALDKKISSLEQSRKKQTKK
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggatttgaaggctaatgttcaagataatctcttgatggagactgaaactaccactgca
gcccttgatgatttgaatgaaaaattcttgcctagcattcatttgcagaagaaaggtgac
cacaactctacaggtgatctagaaaaaaatgcaatggaatccagaaacattggtatgtct
gatatggaaatggaaaataaggcaaataattctaaaatttttagcgagtccactcagaga
tgccttcaagatgaaaagaaatccaatactgagtccaaaccagaaacattcactgaaatt
agtgttggtgaacttaacaaaatgacccgatatgattttttgagactgcaaaaaaagctc
tatttgttggaaagggatgcagaaaatgaacgggaagtgatgaagacagtaaatagtagt
ggcgaaggtgtgccaggagttctttctcatttagaagttgtttcagtaacatctactcgc
tttggacgaatatgcatcacatttgcttcttatgcacaccaaaccttgcctcctcatggc
ctaagaaaaggtgataatgtgagcatttacagtggtgggcccatgtgccgtcaagaagat
cattgcagagatggcgttgttcttgatatatcaaaccaagatgtccacatcactattgat
gaagcctacgaattccaagaaagttcatcgtattcagttaagcactttccctcgctggag
aatattaaacgcatattgaaagccctcaagtgtatggctgaagttcaaggtccctcatat
cacttgtctgcagttctttttggagaatctgatccaatgccacctctcctcaggcttcct
cctaagctaacatcatcaaattcttctaaccagttgattttcttcaacaaaaccttagat
cagtcccaacaagaggctgtagattttgttgtgaaacagcaggaccttgctgttgtgcat
gggcctcctggcactggcaagaccacgactctgatagaaatcatccgtcagcatgtaaaa
atgggtctgaaagttttggctcttgctccttctaacttgggtgttgacaatctggtagaa
agacttgacattgttggcatacgagtggtcaggataggtcatcctgctcgtacaacacct
gctactcaaaggcacacaattgatgctctcatgcacaactatgaggggcgtgaaattgtg
aaggacatccaaaatgagatcaacactttgacaagaaggctcgacttcatttatggaaaa
gacagacacagcacctacaaggaactgggacagttaagaaaagagttgaatgaaagacaa
gaaagaatggtcagagatctaatccaaggtgctgatgtcgttttgtgcactctgatgtca
gctcacactagtaatgcaatgaggtacctcaaaaaggaccattttggcctcactgtcatt
gatgaatgctcgcagggtactgaagcatcttgttatctcagtgtcttacgttcccctaag
ttggttttggctggcgatcaccagcagcttcctccaacagtcctctctcctgaagcttct
gcgctcttgatatcacttatggaacgagtaatagatctgcatggctcaaaaattgtaaaa
atgctgacagtgcaatatcgcatgcatgtggacataatgtcatggtcttcagcagccttg
tacaacaaccagctcattgcacatgaatctgtgtctcaacatttgctcaaggatctgcct
catgtctccaacaatgagtacactggtgtgccactgctgcttgtggacaccagctcgtgt
ccaggctttgaagagagcatagacgagagcatcacagcaagcagtaggagcaacgaaggc
gaggcgtccatggttcttgccctcgtgcagaaaatgatagcagcaggactgagtccgcag
caggttgctgtgatctctccgtacagtcgacaggtgaagttagtgcggtcactcattcaa
gttgactatcctgaagtggaggtccagactgtggatggcttccaagggagagaaaaggaa
gctgtgattttaacactagttcgctccaacaccaagggagagatcggcttcctggctgaa
gatcgtcgtctaaacgtggctgtgacccgagcgcgtcggcatctgagtgtggtgtgcgac
acgcagacgttgcagcagcacagctttctcaagaccttcgttgagtacatgctcaccaac
gcgagagtggtgcgcgccgagcacatggatgaagagaactgcacgcaaatcagtgcagat
tttcgtgatttagatctcagtgatattcttaagcctcaaaagcctgaagtcaagcctgag
tcaaagtctgaggaacagatagcaaaggaagagtttgagagaactcagattaaaaccgag
cgtattcgcaaaatgctcaacactttcattgagtcttctaataaaaagtatcatttctct
gccaaattgagctcatttgaacgaatgatagttcatgaagcagctcagtccatggggctg
tggcattacagtgagggcttgaacaagaaaagacatgtagttgtgtccaaagaacctgtt
gctgaagctcaggtcgtggcagttagtgacgtaaaatctcctttggacaatgaggtgaag
tgttctcgtgatgaagaagctcctatttataatgttcctcaaagtgaggctaatgactta
tgttctgaagccgctatagtcgagaagcaagctcccactgagcgcctcacgaagcattgt
actatttgtggcaaggatatcctgaaggaaaatttcaccctccatcggcttgcttgtgaa
aagaaagaaaacgaagcaatttctctcagaaataagaaagtgcaagaggaaaaacaaacc
tccgaactcacagctaacaaagaaaactccaaatctaaacgcaagaagaacgaatctaaa
atgaaaagcacgtctgcaaaggaagttgtcacggaggaggaggattttgatgcggtattg
tcagcatttgctgctagccacaagcgctgcaacttggctggctgctctgctgccagcgct
ggaagtctgctgctgcagtcttgcaactactgtcactcctggtactgcctgcagcacttc
attgctgaggcccacggctgtggccatcatgccaggcagcatgccagagcgatggtggtg
cgagaaggggtcatctaccctgggtctggggtgccgtccaagcttccttcgcacgaccgc
cgtgcgcagctgcaacgcgcgctcgacaagaaaatatcgtctctcgaacagagccgcaag
aaacaaactaaaaaatga
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integrated database retrieval system
