Hyalella azteca: 108681037
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Entry
108681037 CDS
T07535
Name
(RefSeq) collagen alpha-1(IX) chain isoform X1
KO
K08131
collagen type IX alpha
Organism
hazt
Hyalella azteca
Pathway
hazt04512
ECM-receptor interaction
hazt04518
Integrin signaling
hazt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hazt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108681037
04518 Integrin signaling
108681037
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108681037
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
hazt00535
]
108681037
Proteoglycans [BR:
hazt00535
]
Extracellular matrix (ECM) proteoglycans
Others
108681037
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
108681037
NCBI-ProteinID:
XP_018025486
UniProt:
A0A8B7PJG2
LinkDB
All DBs
Position
Unknown
AA seq
987 aa
AA seq
DB search
MRLKMQQLSLLLLLVVQLAAAQYEYETLDGPCADYQPGEDDLQAFDFIRKFRLDVLEASS
PGVKKVRGSSELQTAYRLHAETDLQLATRDIFPQGLPQQFSLIITYRTRRPPTTPWDVMR
ITDISARPQFAITLIPQRESVELTLPSLTGGVQTLVFQGVGALFDREWHKLHFGVYRDRV
VLYVDCYRASEEFFSDPVGLIDVNGQIYISKQGASLRTVPIELQWMVLSCDPTRPERETC
DELPARSSTQTGPAQCEVVCPIGPQGPKGLDGIPGMPGSRGPPGPPGPLGITGPPGENGE
PGSLGFPGPPGPAGPPGRAGEPGIIGRTGPVGPQGVAGQPGSIGAVGPKGDIGPRGPIGP
AGPIGPIGLPGIKGAPGDAVLVEGPTGPQGPPGLPGIVGRPGADGLPGRPGKSGEIGPRG
EPGVDGRRGPEGPKGNPGERGLPGPRGELGPVGPAGRPGPPGAMVDGEMVPGPPGPPGTI
GPPGPAGEPGPVGPAGRAGEDGPPGPRGGKGDRGPAGNPGENGERGEPGRTGPPGEAGAK
GQAGVPGIPGLIGKPGIVGLSGPEGPIGAPGPAGPKGDPGSRGPPGLNGEPAPPGAPGPQ
GATGTPGPRGEEGPPGPAGPPGPQGAAGNPGMMGIVGPKGHPGLAGLKGERGKAGRDGEV
GPAGPPGPIGAPGVQGPAGLRGRDGSKGPEGPPGPPGNVGLPGPMGPPGVVGPAGPPGLQ
GFTGKPGTPGQPGPPGEPGPPGVGGGELIAGERHYGLPGVQGPMGPPGMPGERGADGERG
PAGKQGNPGLPGAHGSTGLPGPAGQRGPPGNPGVDGTPGREYTEADLREICASVLRSQLT
EIAKTLRGPPGPPGQGLRGPPGEEGDPGVPGLAGIPGEVGPRGYTGHPGATGPQGSPGPP
GPRGYKGERGEMGEGREGPPGPAGPPGPEGPKGTGERGRMGDRGPPGQMGRQGGRGSPGP
PGQPGYCEHCNGALAYSAASQGNTKGP
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgaaaatgcagcagctgtcgctgcttctgctgctcgtcgtgcagctggcagcc
gcgcagtacgagtacgagacgctggacggtccgtgcgcggactaccagcccggcgaggac
gacctgcaggccttcgacttcatcaggaagttcagactcgacgtcctcgaggcgagcagc
ccgggcgttaagaaggtccggggctccagtgaactgcagaccgcctacagactgcatgct
gagactgacctgcagctcgccactcgggatattttcccgcaaggcttgccccagcagttc
tcgctgatcatcacctaccgcacgcgccggccccccaccacgccctgggacgtcatgcgc
atcacggacatcagcgcccgcccgcagttcgccatcaccctcatcccccagagggagagt
gtcgagctcacgctaccctcgctcacgggtggcgtgcagaccctcgtcttccaaggggtc
ggggctctgtttgaccgtgagtggcacaagcttcacttcggcgtgtaccgggaccgtgtg
gtgctgtacgtggactgctacagggcgtcagaggagttcttctcagatcctgtgggactc
atcgacgtcaacggccagatctacatctccaagcagggcgcctcgctgcgcaccgtgcct
attgaactgcagtggatggtgctgagctgcgaccccacgcgtcctgagcgcgagacctgc
gatgagctgccggcccgaagttccacccagactgggcccgcccagtgtgaggtcgtctgt
ccaatcggtccacagggtcccaagggtttggacggtattcccggtatgccagggtcacgc
gggcctcctggccccccgggccccctggggatcacgggcccacctggggagaatggggag
cccggcagtctaggctttcctggtccacctgggcccgctgggccaccgggacgcgctggc
gagcccggcatcatcggcaggactggcccagttgggccccaaggcgtcgctggacagcct
ggtagcatcggcgctgtgggaccaaagggcgacatagggccaagaggacccattgggcct
gcaggtccaattggccccattggcctgcctggtattaaaggagccccaggcgacgcagtg
ctcgttgaaggccccactgggccacagggtccgcctggattaccgggaattgtgggacgt
cctggagctgacggcttacctgggcgacccggcaaaagtggcgagattggacccagaggc
gaacccggggtggacggacggcggggcccagaggggcccaaaggcaatccaggagaaaga
ggccttcccggccccaggggagagttgggcccagtgggccctgcgggacgacctggcccc
ccaggtgcgatggtcgacggggagatggtacctgggcccccgggccctccaggaaccatt
gggccaccaggcccagcgggcgagccgggcccagttgggcctgccggccgagctggagaa
gatggcccccctgggccccgtgggggcaaaggggaccgcggacctgccggcaatcctggc
gagaatggggagcgcggggagccgggacgcacgggcccccctggggaggctggggccaag
ggacaggccggagtcccaggcattcctggcctcatcggcaaaccaggcattgtgggccta
tcgggtccagagggccctattggcgcacccgggcccgctgggcccaaaggagaccctggg
tcaagaggccctcctggtttaaacggcgagcccgcccctcccggtgcacctgggccccag
ggggccacaggaactcccgggccacggggtgaagaaggtccccctggtcccgcagggccc
cctgggcctcaaggtgctgccggtaatcctggaatgatgggaatcgttggccccaaaggg
catccgggcctcgctggtctcaagggtgagcgaggaaaagcgggtcgagatggagaagtt
gggcccgctgggcccccgggccctattggggcgccaggagtacaaggtcccgctggtctc
agaggacgtgatgggagcaaggggccagagggcccgccgggccctcctggcaatgtggga
ctccctggcccaatgggcccgcctggcgtggtggggccagcgggtcctccgggacttcaa
gggttcaccggcaagcccggaaccccgggccaacctggacccccgggggagcctgggccc
cctggcgtggggggaggggagctcatcgctggggaacgacattatggcctccctggggtc
cagggccccatggggccccctggcatgcccggcgagagaggcgcggacggcgagcgtgga
cccgcgggcaaacaaggcaaccccgggctcccgggcgctcacgggtccacgggcctaccg
gggccagcgggccaacgtggcccccccggcaaccctggcgtcgatggcacccccggccgc
gagtacaccgaggcagacctgcgggagatctgcgcctccgtcctgcgatcccagctaact
gagattgccaagaccctgcgtggcccaccgggcccaccgggacagggactgcgaggacct
cctggcgaagagggcgaccctggagtgccaggtctggccggcattcctggtgaggttggc
ccccgcgggtacacgggccatcctggggccacgggccctcagggctcacccggcccacca
ggcccaaggggatacaagggcgagcgcggcgagatgggcgagggcagagaaggcccacct
ggccccgctgggcccccaggccccgaaggccccaaggggacaggggagcgaggccgcatg
ggtgaccgagggcccccgggtcagatgggccgccaggggggacgggggtctccggggccc
ccgggccagccgggctactgcgagcactgcaacggagccctggcctactccgcggcctca
cagggcaacaccaaagggccttag
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