Hyalella azteca: 108681245
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Entry
108681245 CDS
T07535
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
hazt
Hyalella azteca
Pathway
hazt03030
DNA replication
hazt03410
Base excision repair
hazt03420
Nucleotide excision repair
hazt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hazt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108681245
03410 Base excision repair
108681245
03420 Nucleotide excision repair
108681245
03430 Mismatch repair
108681245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hazt03032
]
108681245
03400 DNA repair and recombination proteins [BR:
hazt03400
]
108681245
DNA replication proteins [BR:
hazt03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
108681245
DNA repair and recombination proteins [BR:
hazt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
108681245
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA
BRCT
AAA_22
PTCB-BRCT
AAA_30
AAA_33
Rad17
AAA_18
RuvB_N
AAA_17
nSTAND3
AAA_5
AAA_14
AAA_16
RNA_helicase
AAA_2
NTPase_1
AAA_19
AAA_7
BRCT_2
Motif
Other DBs
NCBI-GeneID:
108681245
NCBI-ProteinID:
XP_018025752
UniProt:
A0A8B7PJV9
LinkDB
All DBs
Position
Unknown
AA seq
1094 aa
AA seq
DB search
MDIRNYFSVLNNKSKKEGTSESKTVSALPKQQLPKKKKRILDSDDEDPVPPQKIQIVDLS
EDSDDDIFLNTTRTGEKKSDMKKSKRAKANNSKTRKMEKSPAKPLKPVTPAMFFSSAAAK
KSDAATERHNVQDKKRKAHDSSVEDEESPYPKAPKLESKAGCGTRSGAADLQLSSSPKSK
TPIKKESLLIKEESNTHPCHESANDLKQTCKKTNLKKQISSSSNSDLSPPKPNENSPPSK
SSQASASSYKIPKIKHKECSTQITDQSKKSPNKSPVKKSSKDVKLTLEADHRKKSKTKAK
SYVMEVVPSSPTKSKSSSLQKQLPASPDPFLDDSVVASPDKSILVEKKKQQAKAYQKYLQ
RAGPRNPGSKMVPEGAPGCLADLSFVLSGVLESLDRTEVTEIVQRYGGRVVGSVSKKTTH
LLIGDDAGASKMAKAEQLGTKVISEDDFLEMLRTRPGTAPAAEESPVASSAKNSTPKANK
TVKLSAARKNSSSSSASPGIIAEGSPMSSQNSISSSQPLTQPLDTQDLQDRNSEELMWVD
KYKPVSLKNVIGQQGDKSNARKLLHWLSNWAQNHSGGKKLAKPSPWAKDNDGSFFKAALL
SGPPGVGKTTTAQLVCRELGFDAVELNASDTRSKRSLTEEVSQLLSNTSLSNFASGHGGA
ATSRHHVLLMDEVDGMAGNEDRGGVQELISLMKTSKVPIICMCNDRQHPKIRSLANHCFD
LRFSKPRVEQIRGAMMSVCFREGVKLKPEALDQIILGSNQDVRQILHHLAVFSANNKSMD
SEQTKKDANLAKKDLKFGPWDVCRQVFNESDRKNMNIHQKSDLFFYDYSIGPLFVQENYW
KARPKSTQNEGRVALLQQLAKAANNIADGDLVERAIRSGNNWSLLPTQAIFSCVLPGEAM
SGHLSGEIQFPAWLGNNSKKNKMDRLSQELLSHMRLKISGNKTDVALEYSRSVLGLVLRP
LLTGLEGVTEAVEAMNAYGLAREDLDSVTEVAQWSGKQDLFSKIDSKVKAAFTRALNKTA
VVARPTSRKKRSAQEDEAYGDDDEDHVSEDEEDDDDITTDALIKIKKPAAAASSSKKAAA
TSSASGKGRGKGKK
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atggatatcaggaattacttcagtgttttgaataacaagagcaagaaagagggcacaagt
gagagtaaaacagtttcagctctgccaaaacagcaactgcctaagaagaagaaaagaatt
ctagattctgatgatgaagatccagtacctccacagaaaatccaaattgttgatctttct
gaagattctgatgatgacatattcctcaacactacaagaactggtgagaagaaatcagat
atgaaaaaatcgaaaagggctaaagctaacaactcgaagacaagaaagatggagaagagt
ccagccaagcctttgaagccagtgacacctgctatgttcttcagctctgctgcagcaaag
aaatctgatgctgctactgaaaggcacaatgttcaagataaaaagagaaaggctcatgat
tcttctgtagaagatgaggagtccccataccccaaagctcctaagctggagagcaaggct
ggttgtggcactaggagtggagcagcagacctacagttatcttcatctccaaaatcaaaa
actcctatcaagaaggaaagtttgttgataaaggaggagagcaatacacatccttgtcat
gagagtgccaatgatttgaaacagacctgcaaaaaaactaatctgaagaaacaaatttca
tcatcaagtaacagtgatttaagccctcccaaaccaaatgaaaatagtccgcctagtaag
agctctcaagcatctgctagttcatacaagatcccaaagattaaacacaaagaatgctct
acacaaataacagatcagtctaaaaagtccccgaacaagtctcctgttaagaagtcatcc
aaagacgtaaaattaacattggaagcggatcatagaaagaaatccaaaacaaaagccaag
tcttatgtgatggaggtggtaccttcatcacctactaaaagcaagagttctagtctccaa
aagcaattgcctgcaagtcctgatcctttcttagatgacagtgtagttgctagtcctgat
aagtcaatcttggtagagaagaagaagcagcaggcgaaggcataccagaagtaccttcaa
cgggctggaccaagaaatcccggcagtaaaatggttcctgagggtgcgccagggtgttta
gcagacctgtcatttgtgctctctggagtgctggagtcgctggaccgtactgaagtgact
gaaatagttcagcgctatggcggtcgcgtcgtggggtcagtttctaagaagactacgcac
ttgctcattggtgacgatgcaggggcttcaaagatggctaaggcagagcaactgggcacc
aaagtaatctcggaagacgattttctggaaatgctgcggactcgtcctggtacagcccct
gctgcagaggaaagccccgttgcttcttctgcaaagaactccactcctaaggccaataaa
acagtcaagttgtctgcagcgcggaaaaattcttcttcttcttcagcttctcctggaatt
attgctgaaggcagtccaatgtcctcgcaaaacagcattagcagctcgcagcctttgacc
cagcctcttgacactcaagatttgcaagatcgcaactcagaagaactcatgtgggtggat
aaatacaagcctgtgtctctgaagaatgtcataggccagcagggcgacaagagcaatgcc
aggaagttgctgcactggctcagtaactgggctcaaaatcattcaggcggcaagaaactt
gccaaaccaagtccttgggcaaaagacaatgatggttctttcttcaaggccgcgcttctt
tctggacctcctggcgtagggaagacaacgacagctcagctggtgtgccgagagttgggt
tttgatgccgtggagttgaacgcgtcggacacgcgctctaaacgctctctcactgaagag
gtttcacagctgctcagcaatactagtctcagcaactttgcttctggccacggaggggca
gcaactagtcgccaccacgtgctcctgatggacgaggtggacggcatggctggcaacgaa
gacaggggcggcgtgcaggagctcatttctctgatgaagacaagcaaggtccccatcatc
tgcatgtgcaatgaccgccaacatccaaagatccgttcccttgccaaccattgctttgat
ctgcgcttcagcaaacctcgtgttgagcagatcaggggagccatgatgtccgtctgcttc
cgtgagggcgtgaaactgaagccagaggctttagatcaaataatcttgggcagcaaccaa
gacgtgcggcagatactgcatcatctcgccgttttctccgccaacaacaaatccatggac
tctgaacagacaaagaaagatgccaaccttgcaaaaaaagacctcaaatttggtccttgg
gatgtttgtcgacaagtattcaatgaaagcgaccgtaaaaacatgaacatccaccaaaag
agcgatctgttcttctatgactactccattggacctctcttcgtgcaggagaactattgg
aaggccaggccaaaatctacacagaacgagggcagagtagcgctgctgcagcagcttgcc
aaggcagccaacaacattgcagatggcgacctcgtcgagcgagccatcaggagcggcaac
aactggtcgctgctgcccacgcaggcaatattcagctgcgtgttgcctggcgaggcgatg
tccggtcatctgtcaggggagatccagttccccgcgtggctcggcaacaacagcaagaag
aacaaaatggacagactctcacaggagctgctctcgcacatgcgactcaagatctcaggc
aataagacggacgttgccctggagtacagccgctcagtgctgggtttggttttgcgccct
ctgctgaccggcctggagggagtcaccgaagcggtggaagccatgaacgcttatggcctg
gctagagaagacttggatagtgtcactgaggtcgcacaatggtctggcaagcaggatctc
ttttcgaagatcgacagtaaggtgaaagcggcgttcacgcgcgccctgaacaagaccgct
gtcgtcgcacgcccgacgagcagaaagaagcgcagcgcgcaggaggacgaggcttacggc
gatgacgatgaggaccatgtctctgaagacgaagaagatgacgatgacatcaccaccgat
gctctcatcaagatcaagaagcctgccgcggcagcctcatcttccaagaaagctgctgct
acctcttctgcttctggcaaaggacgtggcaaggggaaaaaatga
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integrated database retrieval system
