Hyalella azteca: 108681483
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Entry
108681483 CDS
T07535
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
hazt
Hyalella azteca
Pathway
hazt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hazt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108681483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hazt03019
]
108681483
Messenger RNA biogenesis [BR:
hazt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
108681483
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
108681483
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
108681483
NCBI-ProteinID:
XP_018026007
UniProt:
A0A8B7PKQ4
LinkDB
All DBs
Position
Unknown
AA seq
231 aa
AA seq
DB search
MTKLNCFLVLINLLQLISFNIFLQNFHIKLIVMSANASPPIPSSNKNICVPGDRLCLAGN
QCHAAEGTYIFNGYIYASRVGRVSTFQKNEQTFVKVTGLSGHSVIPEVGSLVTARVLTIH
SQMIKVAILAVDDVTLHTAFRGMVRKVNVREHLVDKVEMYECFRPDDIILARILSLGDAR
SYEMSTSLPELGVVTARCEEGHLMVPVSWTSMKCHCRTENRKVAKVVPPNT
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaattgaattgcttcttagtcttaatcaatttgctacagctcataagctttaat
atttttttacagaattttcatataaaattaatagttatgtctgccaacgcatctcctccc
attccctcgtcaaacaaaaacatttgtgttcctggtgaccgcctatgccttgctgggaat
cagtgtcatgcagctgagggcacatatatttttaatgggtatatatatgcttcaagagtt
ggaagagtctctacctttcagaaaaatgaacagacttttgtgaaggtaacaggcttaagt
gggcattcagttattcctgaagttggctctctggtgacagctcgtgtactcaccatccac
agtcagatgattaaggtagccatcctggcggtggacgacgtgacgctacacacagccttc
agaggcatggttcgcaaagtcaatgtgcgggaacaccttgttgacaaggtggagatgtac
gaatgcttccgccctgacgacatcattttagcgcgcattctctcccttggtgacgcacgc
agctacgagatgagcacgagtctgcctgagctgggcgtggtgactgccaggtgcgaggaa
ggccatctcatggtgccagtgtcctggaccagcatgaagtgccattgtaggacagagaac
agaaaagttgctaaggttgtgccaccaaatacataa
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