KEGG   Hyalella azteca: 108682067
Entry
108682067         CDS       T07535                                 
Name
(RefSeq) pre-mRNA-splicing factor RBM22
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
hazt  Hyalella azteca
Pathway
hazt03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hazt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108682067
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hazt03041]
    108682067
Spliceosome [BR:hazt03041]
 Complex B
  Other components
   Prp19-related factors
    108682067
 Complex C
    108682067
SSDB
Motif
Pfam: STL11_N zf-CCCH_RBM22 RRM_1 zf_CCCH_4 Torus zf-CCCH_2 zf-CCCH Nup35_RRM_2 zf-CCCH_4 RRM_occluded RRM_YTH1 zf-CCCH_12 zf-CCCH_PARP12
Other DBs
NCBI-GeneID: 108682067
NCBI-ProteinID: XP_018026666
UniProt: A0A8B7PMM1
LinkDB
Position
Unknown
AA seq 505 aa
MSMSKSTNTYNRQNWEDSDFPILCQTCLGDNPYIRMTRDRYGKECKICTRPFTVFRWCPG
ARMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPTQVRDEALSLQDDLPKSDVNKEYYIQN
MERQMATTSDGSTAAGALGKAKAPSEMLMRLARTTPYYKRNRPHICSFWVKGECKRGEEC
PYRHEKPTDPDDPLADQNIKDRYYGVNDPVADKLLKRAEAMPQLDPPEDKSITTLYVGNL
GDRIGEKELRDHFYQFGEIRSVIVASKQQFAFVMFTTRSAAELAAERSYNKLILQGRRLN
IKWGKAQARQGNTPVEGPEFREALQPVPGLPSLPPPPETLQNNFFNLGPTDLNIPLPPGT
GPAGSAATKGTKSDGKTSSGTEPVRGPPLPSQTPMGSPPARGMSLPPGVMPPPHLSLSVP
PRLPQNVPHRPSGHLPPLQPPPFFPVHLRGQLRPGMRPAFYPQPPPIPGVGPPPMGGMIH
YPSQDPTQMGAIPTTAPPLPGVPPS
NT seq 1518 nt   +upstreamnt  +downstreamnt
atgtcgatgtctaaatccacaaatacctacaacagacaaaattgggaagattcggatttt
cccatcttgtgccaaacgtgtctgggtgacaacccttacattcgcatgactcgagaccgg
tatggaaaagaatgcaaaatctgcactcgacctttcactgtttttcgctggtgtcctgga
gccaggatgagattcaagaaaacagaagtgtgtcagacatgttcaaagttgaagaatgtg
tgtcaaacatgtttgctggatctcgagtatggattacctacacaagtacgagatgaggct
ctgagcttgcaagatgacctacctaaaagtgacgtcaacaaggagtattacatccagaac
atggagcgccaaatggccactacctcagatggctcgactgctgcaggtgcactgggcaaa
gccaaggctccctccgagatgctcatgagacttgcaagaactacgccatattacaagagg
aatcgcccacacatatgctccttctgggtcaagggagagtgcaagcgtggtgaagaatgt
ccatatcggcatgagaagcccacagatcctgatgatccacttgctgatcaaaacatcaag
gatcgttactacggggttaatgatcccgtggcagataagctccttaagagagcagaggca
atgccacagcttgatcctcctgaagataaaagcatcacaactctgtatgttggcaacctg
ggggatcgaattggggagaaggagcttagagaccatttctaccagttcggcgaaatcaga
agtgtaatcgttgcctctaagcagcagtttgcctttgtgatgttcactactcgctctgca
gctgaactggccgctgaacgctcatacaacaaactgatcttgcaaggacgacgtttaaac
attaaatgggggaaggctcaggcaaggcagggcaatacacccgtggaggggccagagttc
agagaggccttgcagcctgtgcctggcctcccctctttgcctccacctcctgaaactttg
cagaacaacttcttcaatcttgggccgacggatctgaacatcccactgcctcccggcact
gggccagcagggtcagctgcaaccaaaggcaccaagtccgatggcaagacttcgtcaggg
actgaaccagttagaggtcctcctttgccatcacaaacgcctatgggatcgcctcccgct
cgcgggatgtctcttcctcctggggtcatgccgcctccccaccttagtctctccgtgcca
cctcgccttccccagaatgttcctcatcgaccctcaggacacttgccgcctcttcagcca
ccacctttctttcctgtacacttgcggggtcagctgaggccggggatgcgacctgcattt
tatcctcagcctcccccaatacctggtgtgggccctcctccgatggggggaatgatacat
tacccgtcacaagaccccacacaaatgggagctattcccactacagctcctccacttccc
ggtgtacctccatcttag

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