Hyalella azteca: 108682067
Help
Entry
108682067 CDS
T07535
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
hazt
Hyalella azteca
Pathway
hazt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hazt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108682067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hazt03041
]
108682067
Spliceosome [BR:
hazt03041
]
Complex B
Other components
Prp19-related factors
108682067
Complex C
108682067
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH
Nup35_RRM_2
zf-CCCH_4
RRM_occluded
RRM_YTH1
zf-CCCH_12
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
108682067
NCBI-ProteinID:
XP_018026666
UniProt:
A0A8B7PMM1
LinkDB
All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
MSMSKSTNTYNRQNWEDSDFPILCQTCLGDNPYIRMTRDRYGKECKICTRPFTVFRWCPG
ARMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPTQVRDEALSLQDDLPKSDVNKEYYIQN
MERQMATTSDGSTAAGALGKAKAPSEMLMRLARTTPYYKRNRPHICSFWVKGECKRGEEC
PYRHEKPTDPDDPLADQNIKDRYYGVNDPVADKLLKRAEAMPQLDPPEDKSITTLYVGNL
GDRIGEKELRDHFYQFGEIRSVIVASKQQFAFVMFTTRSAAELAAERSYNKLILQGRRLN
IKWGKAQARQGNTPVEGPEFREALQPVPGLPSLPPPPETLQNNFFNLGPTDLNIPLPPGT
GPAGSAATKGTKSDGKTSSGTEPVRGPPLPSQTPMGSPPARGMSLPPGVMPPPHLSLSVP
PRLPQNVPHRPSGHLPPLQPPPFFPVHLRGQLRPGMRPAFYPQPPPIPGVGPPPMGGMIH
YPSQDPTQMGAIPTTAPPLPGVPPS
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtctaaatccacaaatacctacaacagacaaaattgggaagattcggatttt
cccatcttgtgccaaacgtgtctgggtgacaacccttacattcgcatgactcgagaccgg
tatggaaaagaatgcaaaatctgcactcgacctttcactgtttttcgctggtgtcctgga
gccaggatgagattcaagaaaacagaagtgtgtcagacatgttcaaagttgaagaatgtg
tgtcaaacatgtttgctggatctcgagtatggattacctacacaagtacgagatgaggct
ctgagcttgcaagatgacctacctaaaagtgacgtcaacaaggagtattacatccagaac
atggagcgccaaatggccactacctcagatggctcgactgctgcaggtgcactgggcaaa
gccaaggctccctccgagatgctcatgagacttgcaagaactacgccatattacaagagg
aatcgcccacacatatgctccttctgggtcaagggagagtgcaagcgtggtgaagaatgt
ccatatcggcatgagaagcccacagatcctgatgatccacttgctgatcaaaacatcaag
gatcgttactacggggttaatgatcccgtggcagataagctccttaagagagcagaggca
atgccacagcttgatcctcctgaagataaaagcatcacaactctgtatgttggcaacctg
ggggatcgaattggggagaaggagcttagagaccatttctaccagttcggcgaaatcaga
agtgtaatcgttgcctctaagcagcagtttgcctttgtgatgttcactactcgctctgca
gctgaactggccgctgaacgctcatacaacaaactgatcttgcaaggacgacgtttaaac
attaaatgggggaaggctcaggcaaggcagggcaatacacccgtggaggggccagagttc
agagaggccttgcagcctgtgcctggcctcccctctttgcctccacctcctgaaactttg
cagaacaacttcttcaatcttgggccgacggatctgaacatcccactgcctcccggcact
gggccagcagggtcagctgcaaccaaaggcaccaagtccgatggcaagacttcgtcaggg
actgaaccagttagaggtcctcctttgccatcacaaacgcctatgggatcgcctcccgct
cgcgggatgtctcttcctcctggggtcatgccgcctccccaccttagtctctccgtgcca
cctcgccttccccagaatgttcctcatcgaccctcaggacacttgccgcctcttcagcca
ccacctttctttcctgtacacttgcggggtcagctgaggccggggatgcgacctgcattt
tatcctcagcctcccccaatacctggtgtgggccctcctccgatggggggaatgatacat
tacccgtcacaagaccccacacaaatgggagctattcccactacagctcctccacttccc
ggtgtacctccatcttag
DBGET
integrated database retrieval system