Hyalella azteca: 108682863
Help
Entry
108682863 CDS
T07535
Name
(RefSeq) nuclear pore complex protein Nup93
KO
K14309
nuclear pore complex protein Nup93
Organism
hazt
Hyalella azteca
Pathway
hazt03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hazt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108682863
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hazt03019
]
108682863
Messenger RNA biogenesis [BR:
hazt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108682863
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
Clathrin
POPLD
Motif
Other DBs
NCBI-GeneID:
108682863
NCBI-ProteinID:
XP_047736744
UniProt:
A0A979FKF8
LinkDB
All DBs
Position
Unknown
AA seq
1104 aa
AA seq
DB search
MATERSLTELLQAAQQMTTKTDTSLPLSSLQTRSDGSKPYTSMEVVRDDLPRVDRSLAQL
VKVGEALWPGRGSRGDTTTLPADQEAHASILLGSRGLDLPHMTCRLTALTASPHTASPHT
AYPESASPGIGLLLSSVGYIMEVATPTGLSHKEGDTEGAGEEGAGDIPALGADVAEYVVE
ELETAEFQVIEVENYAMCELATTIDAHDETSEEVECRAAQQRQSEWELSKQSLLQAFVQD
GDLLSLSLPLQEALTVSEGRPAVGEPGETACGGLSSDQLAYTRPLVDHNERALERSSSSG
GAGLAQAMCDLAVTVDAHDQVAATGPCIVAVICCISDDNLLYKTHIKTMVYNNLARAGLK
GVPGLAALVKAYIAVFVGGEVAPLLEDGVGGNGAPVWPLLYYCVRAGGLREAASAATENS
CPAVVEVVACLQQASRSADQRVSAENEKRLRVSYRRSARAIRDPYKRALYCVLARCDVME
DHSDVATTTDDYLWLKLCMVETSSEGERVPPTPTVGGAGGAKQDVLTLAALQRLMYKQYG
TSRALMHTYPYMYPYTCPHTCPYMCPHTYPYMCPHTYPYTCPHTPACTKCLRCGRGTGDR
ERSSSSGGAGLAQAMCDLAVTVDAHDQVAAAGPWCGGDVAGGGSDVCSXTRRILASILLG
SRGLDLPHMTCRLTALTASPHTASPHTAYPVETSSEGERVPPTPTVGGAGGAKQDVLTLA
ALQRLMYKQYGETHFNAYEQPLLYTNVLLLTAQFEAAVEFLRRSDRLLHHAVHVAVCCYT
AGLLRLPASTAAPLLSRETEESDVLFLNLPRVVLLYTRRFETSHPREALHYFYLLRGLKT
PRGEDVMLQCVRELALSSRLFDLLLGEQRDDGTTCTRSPGLLDHFKVDVDELTEAVAQDC
EQRGLHEDAVRLYDLAKKHEKVISLLCKLLSQVVHLNQPTTTTTPTIPPTAGSGSDRERI
LELACTIGLRYRSQGHTASVQSAATLHLLLDLSTVFDLYHAQRYHDALEVVRRLQLIALD
PDEVEARVAGLAAVSADVKTVIPPLLLAAITATHHLYSTTTSGASSTQHLRRQARAVVTF
AGLIPLRLHAHINARLVQLEALIN
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgagcgcagcctgacagagctgctgcaggcggcacagcagatgaccaccaaa
acagacacaagtcttcctctgagcagcctccagacccgctccgatggctccaagccttac
acctccatggaggtggtcagggacgacctcccgcgagtagaccgctcgctggctcagctg
gtcaaggttggtgaggcgctgtggcctggacgggggagccgtggtgacaccactacacta
ccagcagaccaggaggcacacgcgtctatcttgctggggtcgcgagggttggacctgcct
cacatgacttgccgcctcacagccctcaccgcgtcccctcacacggcctcccctcacacg
gcctacccggagtctgcctcacctggtataggcctattgttatcctctgttggatatata
atggaggttgccactcccacgggactgtcccacaaggagggggacactgagggtgctggg
gaagaaggtgcaggcgacatccccgcactcggggcagacgtcgctgagtatgtggtcgag
gaactggagaccgcggagttccaggttattgaggtggaaaattatgccatgtgcgagctt
gcgaccaccatagacgcccacgacgagacaagcgaggaggtggagtgtcgtgcggcgcaa
cagcggcagagcgagtgggagctcagcaagcagagtctgctgcaggccttcgtgcaggac
ggcgacctgctgtccctcagcctgcctctacaggaggcgctgacggtgtcagagggccgc
cccgcggtcggggagcctggagagacggcatgcggagggctgagcagcgaccagctcgcc
tacacgcgccccctcgtggaccacaatgagcgcgccctggagcgcagctcttcgtcagga
ggggcggggctcgctcaggccatgtgcgacctcgccgtcaccgtcgacgcccacgaccag
gtcgccgctacgggtccttgtattgttgcagtcatttgctgtatttctgacgataatttg
ctgtacaagacgcacatcaagacgatggtgtacaacaacctggcgagggcgggactcaag
ggcgtgcctggtctcgcagcgctggtgaaggcctacatcgcggtgtttgtggggggtgag
gtcgcccccctgctggaggacggggtggggggcaacggcgcccccgtgtggccgctactg
tactactgcgtcagggcgggggggttgagggaggccgccagcgctgctactgagaacagc
tgccctgcagtggtggaggtggtggcgtgtctgcagcaggcgagcaggtctgcagaccag
cgcgtgtctgcagagaacgagaagcgactcagggtctcgtacaggaggtctgcacgggcc
atcagggacccgtacaaacgggccctgtactgcgtgcttgcccgttgtgacgtcatggag
gaccacagcgacgtcgccaccaccacagacgactacctctggctcaagctgtgtatggtg
gagacaagcagtgagggggagcgggtgccccccacccccactgtaggaggcgcagggggg
gccaagcaggacgtcttgacgctggcagcgctgcagcgactcatgtacaagcagtacggt
acgtcacgtgccctcatgcacacatatccttatatgtatccttacacgtgccctcacacg
tgcccttacatgtgccctcacacgtatccttacatgtgccctcacacatatccttacacg
tgccctcacacacctgcctgtaccaaatgtttaagatgtggtcgaggaactggagaccga
gagcgcagctcttcgtcaggaggggcggggctcgctcaggccatgtgcgacctcgccgtc
accgtcgacgcccacgaccaggtcgccgctgcgggcccttggtgtggtggagatgtggca
ggtggtggcagcgatgtgtgcagctgnacgaggcgcattttggcgtccatcttgctgggg
tcgcgagggttggacctgcctcacatgacttgccgcctcacagccctcaccgcgtcccct
cacacggcctcccctcacacggcctacccggtggagacaagcagtgagggggagcgggtg
ccccccactcccactgtagggggcgccgggggggccaagcaggacgtcttgacgctggca
gcgctgcagcgactcatgtacaagcagtacggggagactcacttcaacgcctacgagcag
cctctgctctacaccaacgtgctgctgctgacggcgcagttcgaggcggccgtggagttc
ctacgtcgcagtgaccgcctcctgcaccacgcagtgcacgtcgccgtctgttgctacacc
gccggtctactgcgtctacccgcgtctactgctgctccactgctgtcgcgcgagacggag
gagtctgatgtgctcttcctgaacctgccgcgtgtggtgctgctctacacaagacgcttc
gagacctcccacccccgggaggccctgcactacttctacctcctcagaggcctcaagacc
ccccgtggagaggacgtgatgctgcagtgcgtgcgggagctggcgctgtcgtcacgcctc
ttcgacctcctgctgggggagcagcgcgacgacggcacaacctgcacccgcagcccgggc
ctgctggaccacttcaaggttgacgttgatgagctgacggaggcggtggctcaggactgc
gagcagcgcggcctgcacgaggacgccgtgcgactctacgacctggccaagaaacacgag
aaggtgataagcctgctgtgcaaactgctgtcccaggtggtacatctgaaccaacccaca
accacgacgacccccaccatcccgccgacagctggttctggtagcgaccgtgagcgcatc
ctggagctggcttgcaccatcgggctcaggtaccgatcccagggacacacagcctcggta
cagtcggctgcaacgctgcacctgctgctggacctctccacggtcttcgacctctaccat
gcgcagcgctaccatgacgccctcgaggtagtgcggcggctgcagctgatcgccctggac
ccggatgaggtggaggcgagagtggcaggtctggccgctgtctccgccgacgtaaagact
gtcatcccgccgctgctgttggccgccatcaccgccacccaccacctatactcaaccacc
acctccggcgcttcctccacgcagcacctccgacgccaggcgcgagccgtggtgaccttc
gctgggctaatacctctgcgtctacacgcccacatcaacgcccgcctcgtgcagctcgag
gccctcatcaactga
DBGET
integrated database retrieval system
