Hyalella azteca: 108683085
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Entry
108683085 CDS
T07535
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
hazt
Hyalella azteca
Pathway
hazt03015
mRNA surveillance pathway
hazt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hazt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108683085
09123 Folding, sorting and degradation
03018 RNA degradation
108683085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hazt03019
]
108683085
03041 Spliceosome [BR:
hazt03041
]
108683085
Messenger RNA biogenesis [BR:
hazt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108683085
mRNA cycle factors
Stress granule specific factors
108683085
Spliceosome [BR:
hazt03041
]
Complex C
Other components
Complex C specific factors
108683085
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RBD_DEAH11
RRM_7
RRM_RdRP1_2
Motif
Other DBs
NCBI-GeneID:
108683085
NCBI-ProteinID:
XP_018027855
UniProt:
A0A6A0GYR2
LinkDB
All DBs
Position
Unknown
AA seq
672 aa
AA seq
DB search
MNATQTGNNSYPLASLYVGDLHEDCTEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYV
NFQQPFDAERALDTMNFDVMKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYD
TFSAFGNILSCKVANDESGNSKGYGFVHFETEEAARSAISKVNGMLLNSKKVYVGKFIPR
AEREKELGEKAKMFTNVYVKNFGDEFDDDKLYETFARFGKITSHKVIVGDDNKSKGFGFV
AFEDPEVAEVAVREMNNFEINNKVLYVGRAQKKGERQAELKKKFDQMKMDRINRTHGVNL
YIKNLDDCIDDDRLRKEFAPYGTITSAKVMMEDGRSKGFGFVCFSLPDEATRAVTEMNGR
ILVAKPLYVALAQRREDRKAQLASQYMQRVAGMRLQHVNQVYPAAPSNYFMQTALQPAGY
RFNNLMPNIRPAAPRWQQPATQVRPGQAQFSVPTAAGYRAATAGPRPAQHATRGVSPGVP
RSAIPQQQVAMGLVQAAGAPRVVAPNAGAVPQMTANLQRPGVHPAAAAAAAAASVVNANT
YKYTPNMRNPPTVNQQGMNMSNAGNAATGGQPAVHVQGQEPLTLNMLATAVPQEQKQMLG
ERLYPLVQDFHPGLCGKITGMLLEMDNSDLLHMLEDRASLKNKMDEALAVLQAHQAKQQV
AASIKKEEQPQM
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccacccagacaggaaacaatagctacccactagcctctctctatgttggggac
ctccatgaggactgcacggaggccatgctgttcgagaagttctcgactgcaggccctgtt
ctctccatccgcgtttgccgcgatatgatcacccgtcggtcacttgggtacgcttacgtc
aatttccagcagcccttcgatgctgagagagcgcttgacaccatgaactttgacgttatg
aagggcaagccaatccgcatcatgtggtcgcagcgtgatccgtccctccgtaagtctggc
gtgggcaacgtcttcattaagaacctggacaagtctattgacaacaaggccatgtacgac
accttctctgcttttggcaacattctcagttgcaaagtggccaatgatgagagtgggaat
tccaaaggatatggttttgtccatttcgagacggaggaggctgccaggagcgccatttcc
aaagtcaacgggatgttgctgaacagcaagaaagtgtacgtgggaaagttcattccgcgt
gctgaacgggaaaaggaacttggtgagaaagccaaaatgttcaccaatgtgtacgtcaag
aactttggtgatgaatttgatgatgacaaactttatgaaacttttgctcgctttggcaag
atcaccagccacaaggtcatcgtgggagatgacaacaagtccaagggctttggtttcgtg
gctttcgaagaccctgaagttgctgaggttgctgttcgtgagatgaacaactttgaaatc
aacaacaaagtcttgtacgtcggtcgcgctcagaagaaaggcgaacgacaagccgagctc
aagaagaagttcgaccagatgaagatggatagaatcaatcgcacgcacggcgttaacttg
tacatcaagaatcttgatgattgcatcgatgacgatcgcctgcgcaaggaatttgctccc
tacggtaccatcactagcgctaaggtcatgatggaagacggtcgctccaagggcttcgga
tttgtctgctttagcctccctgatgaggctactcgcgccgtaacggaaatgaacggccgc
attttggtggccaaacctctgtacgttgcccttgctcagcgccgtgaagatcgcaaggct
cagctcgcttctcagtacatgcaacgcgttgctggaatgcgcctgcagcacgtgaatcaa
gtttatcccgctgctccctccaactatttcatgcaaactgctctccagcccgctggctat
cgcttcaacaacctcatgcctaatattcgccctgctgctcctcgctggcagcaaccagct
actcaggtgcgtcctggacaagcgcaattctcggtacccactgcagcgggctatcgcgca
gctactgctggacctcggcctgctcagcacgctactcgcggagtctcgcctggtgtgccc
cgtagcgccatccctcagcagcaagtggccatgggactcgtgcaggctgctggagctcct
cgcgtggtggctcctaatgctggtgctgtccctcagatgacagctaacttgcagcgtcct
ggtgtccatcccgcagccgctgcagctgctgctgccgcttctgtggtcaacgcgaacacc
tacaagtacacccctaacatgcgtaacccacccactgtcaaccagcagggcatgaacatg
tccaatgctggtaatgctgccacaggtggccagcctgccgtgcatgtgcaagggcaagaa
cctctcacgcttaacatgcttgccactgctgtacctcaggaacaaaagcagatgctcggt
gagcgtctgtatcctcttgtgcaagatttccatcctggcctctgtggaaagatcactggc
atgcttctcgagatggacaatagtgacctgctgcacatgcttgaagatcgcgcttctctc
aagaacaagatggacgaggctctggctgtgcttcaggcccatcaagccaaacagcaagtc
gctgcgagcatcaagaaagaagagcaacctcagatgtaa
DBGET
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