Halorubrum sp. 2020YC2: KI388_00215
Help
Entry
KI388_00215 CDS
T08040
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hazz
Halorubrum sp. 2020YC2
Pathway
hazz03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hazz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KI388_00215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hazz03021
]
KI388_00215
Transcription machinery [BR:
hazz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
KI388_00215
Prokaryotic type
Archaeal type
TFB
KI388_00215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Cyclin_C
Motif
Other DBs
NCBI-ProteinID:
QWC19453
LinkDB
All DBs
Position
complement(40359..41345)
Genome browser
AA seq
328 aa
AA seq
DB search
MTRPTRQRDHDRQRVGDEDAEEDEIDIEDVDELDPEDFDPEDLTRTADGELIHEETGMII
EDEQIDPGPEWRAFNHSERQEKSRVGAPTTKTMHDKGLTTTIDWKDKDAYGRSISSKKRS
QMHRLRKWQERIRTKDAGERNLQFALSEIDRMASALGVPRSVREVASVIYRRALNEDLIR
GRSIEGVSTAALYAACRKEGIPRSLEEISEVSRVDRKEIGRTYRYISQELGLEMRPVDPK
KYVPRFSSELELSEEVQSKANEIIETTAEQGLLSGKSPTGYAAAAIYAASLLCNEKKTQR
EVADVAQVTEVTIRNRYQEQIEAMGIHS
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgacacggcccacccggcaacgggatcacgaccggcagcgcgtgggggacgaggacgcc
gaggaagacgagatcgacatcgaggacgtcgacgaactggaccccgaggacttcgatccg
gaggatctcacccggacggccgacggggagctgatacacgaggagacggggatgatcatc
gaagacgagcagatcgatcccggcccggagtggcgcgcgttcaaccactcggagcgacag
gagaagtcgcgcgtcggcgccccgacgacgaagacgatgcacgacaaggggctgacgacg
acgatcgactggaaggacaaggacgcctacgggcgctccatctcctcgaagaagcggtcg
cagatgcatcgcctgcgcaagtggcaggagcggattcggaccaaggacgcgggcgagcgc
aacctccagttcgcgctctcggagatcgaccggatggcgagcgcgctgggggtcccgcgg
tccgtccgagaggtcgcgtcggtcatctaccgacgcgcgctcaacgaggacctgatccgc
gggcgctccatcgagggcgtctccaccgccgcgctgtacgccgcctgccgcaaggagggg
atcccccggagcctcgaagaaatctcggaggtctcccgcgtcgaccgcaaggagatcggg
cggacgtaccggtacatctcacaggagctgggcttggagatgcgcccggtcgacccgaag
aagtacgtcccgcgcttctcctcggagctcgaactctccgaggaggtccagtcgaaggcc
aacgagatcatcgagacgaccgccgagcaggggctcctctccgggaagtcgcccaccggc
tacgccgccgccgccatctacgcggcctcgctgctctgcaacgagaagaagacccaacgc
gaggtcgcggacgtcgcgcaggtgaccgaggtcaccatccgcaaccggtaccaagagcag
atcgaggcgatgggcatccacagttag
DBGET
integrated database retrieval system
