Halorubrum sp. 2020YC2: KI388_00775
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Entry
KI388_00775 CDS
T08040
Name
(GenBank) ribosome biogenesis/translation initiation ATPase RLI
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
hazz
Halorubrum sp. 2020YC2
Brite
KEGG Orthology (KO) [BR:
hazz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hazz03009
]
KI388_00775
Ribosome biogenesis [BR:
hazz03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
KI388_00775
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
Fer4_RLI
AAA_16
AAA_29
Fer4_6
AAA_23
AAA_22
AAA
Rad17
NB-ARC
Fer4
Fer4_7
Fer4_10
Fer4_21
LdpA_Fe-S-bd
Motif
Other DBs
NCBI-ProteinID:
QWC19550
LinkDB
All DBs
Position
150372..152192
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AA seq
606 aa
AA seq
DB search
MADDSIAVVDLDRCQPDRCNYECMKDCPPNRTGKECITKRGEDAEEGDPDQIHISEEICL
GETCGICVNSCPFDAIEIINLPSELDDDPVHRYGDNAFSLYGLPTPEPGSVTGILGPNGI
GKSTAVHALAGEMVPNLGDYAAEGDWERVLDRFRGTGIQNYLESLKEGDVTVARKPQYVD
QIPNQFDGNTRELLERTDERGALDDLVDRLNIRPVMDQDIDSISGGELQRVAIAACLARD
ADFYFLDEITPYLDIGQRMIVARLIRELADDDAADRSMLVVEHDLAILDLLADTLHVAYG
EPGAYGVITDPKSVRNGINEYLKGYLDNENMRIRPSAITFEEHAPRVASRSETLIEYPDM
RKSYGDGEFELHVEGGEINRSEVLGVVGPNGIGKSTLAQLFTGDLEPNEGELDFALDISY
KPQYIDIDQHMRVDAFLSSITDEFGSSYWNTEIAQPLQLDRVMEQNLSDLSGGERQRVAI
AACLSDDADLYLLDEPSAHLDVEQRVRATTAIRRYAENHDATVMVIDHDIYMIDLLADRL
MVFDGEPAERGRAAPPQDMRDGMNEFLADLEITFRRDERTGRPRINKPGSQLDSQQKRDG
EYYYSG
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgacagcatcgcggtcgtggacctcgaccggtgtcagcccgaccgctgtaac
tacgagtgcatgaaggactgcccgcccaatcggacgggcaaggagtgtatcacgaagcgc
ggcgaggacgcggaggagggcgacccggaccagatccacatctccgaggagatctgtctg
ggcgagacctgcggtatctgcgtcaactcctgcccgttcgacgccatcgagatcatcaac
ctgccctccgaactcgacgacgacccggtccaccgctacggcgacaacgcgttctcgctg
tacggcctcccgacgccggagccgggcagcgtcaccggcatcctcggcccgaacgggatc
gggaagtcgaccgcggtccacgcgctcgccggcgagatggtcccgaacctcggcgactac
gcggccgagggcgactgggagcgcgtgctcgaccgcttccgcggcaccgggatccagaac
tacctcgaatcgctgaaggagggcgacgtgaccgtcgcgcgcaagccgcagtacgtcgac
cagatcccgaaccagttcgacggcaacacccgcgagctgctggagcggaccgacgagcgc
ggcgcgctcgacgacctcgtcgaccggctcaacatccggccggtgatggaccaggacatc
gactccatctccggcggcgagctccagcgcgtcgccatcgcggcgtgtctcgcccgcgac
gccgacttctacttcctcgacgagatcacgccgtacctcgacatcggccagcggatgatc
gtcgcccggctcatccgcgagctggcggacgacgacgccgcggaccggtcgatgctcgtc
gtcgagcacgacctcgccatcctcgacctgctggcggacaccctccacgtcgcgtacggg
gagccgggcgcgtacggggtcatcaccgaccccaagtcggtccgcaacgggatcaacgag
tacctgaaggggtacctcgacaacgagaacatgcggatccgcccgtccgcgatcaccttc
gaggagcacgcgccgcgggtcgcctcccggagcgagacgctgatcgagtaccccgacatg
cggaagtcgtacggcgacggcgagttcgagctgcacgtcgagggcggcgagatcaaccgc
tccgaggtgctcggcgtcgtcggcccgaacgggatcgggaagtcgacgctcgcgcagctg
ttcacgggcgatctggagcccaacgagggcgaactcgacttcgcgctcgacatctcctac
aagccgcagtacatcgacatcgaccagcacatgcgggtcgacgccttcctctcgtctatc
accgacgagttcggctcctcctactggaacacggagatcgcgcagcccctccagctcgac
cgcgtgatggagcagaacctctcggacctctcgggcggggagcggcagcgcgtcgccatc
gcggcttgcctctccgacgacgccgacctctacctgctcgacgagccgtcggcgcacctc
gacgtcgagcagcgcgtgcgggcgacgaccgcgatccgccggtacgccgagaaccacgac
gcgacggtgatggtgatcgaccacgacatctacatgatcgacctcctcgcggaccgcctg
atggtgttcgacggcgagccggccgagcgcggtcgcgccgcgccgccgcaggacatgcga
gacgggatgaacgagtttctcgcggacctcgagatcaccttccgccgcgacgagcgcacg
ggccgcccccggatcaacaagccggggtcgcagctcgacagccagcagaagcgcgacggc
gagtactactactccgggtga
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