Halorubrum sp. 2020YC2: KI388_00980
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Entry
KI388_00980 CDS
T08040
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
hazz
Halorubrum sp. 2020YC2
Brite
KEGG Orthology (KO) [BR:
hazz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hazz03036
]
KI388_00980 (smc)
Chromosome and associated proteins [BR:
hazz03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
KI388_00980 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
CCDC39
AAA_21
FKBP15
Rod_CreS
ATG16
AAA_23
DUF1664
CENP-F_leu_zip
CCDC113_CCDC96_CC
AAA_13
APG6_N
AAA_29
AAA_15
DUF724
MscS_porin
GAS
DUF4407
KIF21A_4th
LIP-1
HAUS1
DUF4200
Fib_alpha
DUF3450
CCDC93_CC
Fez1
Snapin_Pallidin
Filament
Exonuc_VII_L
Phage_scaffold
NPV_P10
TMEM120A-B
OVT1
FlaC_arch
EzrA
Motif
Other DBs
NCBI-ProteinID:
QWC19588
LinkDB
All DBs
Position
188620..192201
Genome browser
AA seq
1193 aa
AA seq
DB search
MHITEVVLDGFKSFGRTTRIPFYEDFTVVTGPNGSGKSNIIDGVLFALGLARTRGIRAKK
LTDLIYNPGHDDGEAADGPNEASVTVVLSNEDGTLDRSQVVSAAGTENVGDVSEITIKRR
VKETEDNYYSYYYLNGRSVNLSDVQDLLAAAGVTPEGYNVVMQGDVTEIINMTPYQRRGI
IDEIAGVAEFDEKKEAAYEELDTVEDRIGEADLRIGEKEDRLDQLADERETALQYQDLRE
ELEEYRGFRKASELEEKRESLAAVEADIDEAEADLDELRTELDARQGKLTRLEEDLADLN
HEIETKGEEEQIEIRSEIEEIKGEVSRLEDKIESAESRAESAENDRRQAFVQIDRKEEKI
EELEAEIRETKVEKASVKSELATKRSELADVEAEIEGADTEFDELKAELSERKEEIESLR
EEKNETQREKDRLLDEARRRSNAVSEAREKLEAARESLPEHKARISELKGELDKAEKNEA
TIEDAVADLFAEKAEQEEHLEEVEATLREKQNEYAKLEAAADQRGDASWPRAVTEVKSGG
IDGVHGAVGELASVEARYAEACETAAGGRLANVVVDDDGVGSTCIDYLKRRNAGRATFLP
ITEMDDRSLPRKPSLPGVVDFARDLVDYDAEYESIFSYVLGSTLVVEDMATARELMGDYR
MVTLDGDLVEKSGAMTGGSGGGSRYSFTKSGGGKLERLATEISDLEDERQSLQSEIDALD
DDIEDARDRKADAAERVRSLEADVERAEDDLAEAEDRIEELEAELEELEAERESVDAEMT
ALDEELAETDAEIDELAGEISEIEAELADSKIPELSERADEIRAEIDDLEGRMSSLDGRV
NELELEKGYAEDALDDLHDDVEEAQNAKADAEEAIADHEAAIEEREAELAAKKEAIADLE
EELTALKEDREDLREEIREATQRRDEQRSLVSEAESDLSELTDRRDRLEWEIDELESQVG
AYDADEIPDLDEVESRIEELETEMEALEPVNMLAIDEYDEVQEALAEIQQRRDVLVEERD
AIEERIEGYEAAKKETFMETFDSINDHFEDIFARLSAGSGELVLENPEDPFEEGLTMKAQ
PADKPVQRLDAMSGGEKSLTALSFIFAVQRHNPAPFYALDEIDAFLDAVNAERVGEMIEE
LAEEAQFVVVGHRSALLERSDRAIGVTMQGDNLSAVTGMQFGDDADEEVSADD
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgcacattactgaagtcgttctggacgggttcaagagcttcgggcggacgacgaggatc
cccttctacgaggacttcaccgtcgtcaccggcccgaacggctccgggaagtcgaatatc
atcgacggcgtgctgttcgcgctcgggctggcccggacccgcgggatccgcgcgaagaag
ctcaccgacctcatctacaaccccggccacgacgacggcgaggccgcggacggcccgaac
gaggcctcggtgacggtcgtgctctcgaacgaggacggcaccctcgaccggtcgcaggtc
gtctccgccgcgggcaccgagaacgtcggtgacgtctcggagatcacgatcaaacgccgc
gtgaaagagaccgaggacaactactactcgtactactacctcaacggtcgctcggtgaac
ctctcggacgttcaggacctgctcgcggcggcgggcgtcacgccggaggggtacaacgtg
gtgatgcaaggcgacgtcaccgagatcatcaacatgaccccctaccagcggcgggggata
atcgacgagatagcgggcgtcgcggagttcgacgagaagaaggaggccgcctacgaggag
ctagacaccgtcgaagaccggatcggcgaggcggacctccggatcggggagaaggaggac
cgcctcgatcagctcgccgacgagcgcgagaccgccctccagtaccaggacctccgcgag
gagctagaggagtaccgcgggttccggaaggcctcggagctagaggagaagcgcgagtcg
ctcgcggccgtcgaggcggacatcgacgaggcggaggcggacctcgacgagctccggacc
gaactcgacgccagacaggggaagctcacccgcttggaggaggatctggcggatctcaac
cacgagatagagacgaaaggcgaagaggaacagatcgagatccgctcggagatagaggag
atcaaaggcgaggtctcgcggctggaggacaagatcgagtccgcggagtcgcgcgccgag
tcggccgagaacgaccgccgacaggcgttcgtccagatcgatcgcaaggaagagaagatc
gaggagctggaggcggagatccgcgagacgaaagtggagaaggcgtcggtgaaatcggag
ctggcgacgaagcgctcggagctggcggacgtcgaggccgaaatcgagggcgcggacacc
gagttcgacgagctgaaggccgagctgtcggagaggaaggaggaaatcgagtcgctccgc
gaggagaaaaacgagacgcaacgcgagaaggaccggctgctcgacgaggcccgcagacgc
tcgaacgcggtgagcgaggcccgcgagaagctggaggcggcccgcgagtcgctcccggag
cacaaggcgcggatctccgagctgaaaggcgaactcgacaaagccgagaagaacgaggcg
accatcgaggacgcggtcgcggacctgttcgcggagaaggcggagcaggaggagcacctc
gaagaggtcgaggcgacgctccgcgagaagcagaacgagtacgccaagctggaggcggcc
gccgaccagcgcggcgacgcctcctggccgcgggcggtcaccgaggtgaagagcggcggc
atcgacggcgtccacggcgcggtcggagagctggcctcggtcgaggcccggtacgccgag
gcctgcgagaccgccgcgggcggccggctggcgaacgtcgtcgtcgacgacgacggcgtc
ggttcgacctgtatcgactacctcaagcggcgcaacgcggggcgggcgacgttcctcccg
atcacggagatggacgaccggagcctgccgcggaagccctccctgccgggcgtcgtcgac
ttcgcgcgggacctcgtcgactacgacgccgagtacgagtcgatcttctcgtacgtgctc
ggctcgacgctcgtcgtcgaggacatggcgaccgcccgggagctgatgggcgactaccgg
atggtcaccctcgacggcgacctcgtcgagaagtcgggcgcgatgaccggcggctccggc
ggcggctcccgctactcgttcacgaagtccggcggcgggaagctcgaacgcctcgcgacc
gagatatccgacctcgaggacgagcggcagtcgctccagtcggagatcgacgccctcgac
gacgacatcgaggacgcccgcgaccgcaaggccgacgcggccgagcgcgtccggtcgctg
gaggcggacgtcgagcgcgccgaggacgacctcgcggaggccgaggatcggatcgaggag
ttggaagccgagctggaggagctggaggcggaacgcgagtcggtcgacgcggagatgacg
gcgttagacgaggagttggccgagaccgacgcggagatcgacgagctcgccggcgagata
tcggagatcgaggccgagctggccgactcgaagatccccgagctctccgagcgcgccgac
gagatccgcgcggagatagacgatctggagggccggatgagctcgctcgacggccgggtc
aacgagctggagctggagaaggggtacgccgaggacgcgctcgacgacctccacgacgac
gtcgaggaggcccagaacgcgaaggcggacgcggaggaggcgatcgcggaccacgaggcc
gcaatcgaggagagggaggcggagctggcggcgaagaaggaggcgatcgcggacctcgaa
gaagagctcacggcgctgaaggaggaccgcgaggacctccgcgaggagatccgcgaggcg
acccagcggcgcgacgagcagcggtcgctcgtctccgaggccgagtccgacctctcggag
ctcaccgaccgccgcgaccgcttggagtgggagatcgacgagctggagtcgcaggtgggc
gcgtacgacgccgacgaaatccccgacctcgacgaggtggagtcgcggatcgaagagcta
gagaccgagatggaggcgctcgaaccggtgaacatgctcgccatcgacgagtacgacgag
gtgcaggaggcgctggcggagatccaacagcgccgcgacgtgctcgtcgaggagcgcgac
gccatcgaggagcgcatcgaggggtacgaggcggcgaagaaggagacgttcatggagacg
ttcgactcgatcaacgaccacttcgaggacatcttcgcacggctctcggccgggagcggc
gaactcgtcttggagaaccccgaggacccgttcgaggaggggctgacgatgaaggcgcag
cccgcggacaagccggtccagcggctcgacgcgatgagcggcggcgagaagtcgctcacc
gccctctccttcatcttcgccgtccagcggcacaaccccgcgccgttctacgccttagac
gagatcgacgcgttcctcgacgcggtcaacgccgagcgcgtcggggagatgatagaggag
ctggccgaggaggcgcagttcgtcgtcgtcgggcaccgctcggcgctgctggagcgctcg
gaccgcgccatcggcgtcacgatgcagggcgacaacctctcggcggtcaccggcatgcag
ttcggggacgacgccgacgaggaggtgagcgcggatgactga
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