Halorubrum sp. 2020YC2: KI388_01250
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Entry
KI388_01250 CDS
T08040
Name
(GenBank) alpha amylase
Organism
hazz
Halorubrum sp. 2020YC2
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
DUF3459
DUF5696
Malt_amylase_C
GHL6
Motif
Other DBs
NCBI-ProteinID:
QWC19633
UniProt:
A0A8E8KAP9
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Position
complement(243598..245955)
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AA seq
785 aa
AA seq
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MYEPGPPRATSVGESVELAPRSPDPDGTYRWTVRDAPADSALSAGDGPDPDATGPPSSAT
TVGSEGSASDATAPDGSTAALRAGETNRDDDPVVHLAPDAPGTYVLALDAPDGGHRQRVR
AFPDERREAAIRVPAADLPADDPDRVSLLWPRNENRLALDRAERDGDDWVASVRVPPGKH
GFGLVPDGDRSSAHHGVCEVPGPGRPRLSLDAAVVETDAPEAGDRLRLTAAVEAAPTVDD
VERGGDPDALDAAFLVDDRDADPETVAAIESRADGGTLSVPLDDLPNSVRIHAVPHGERY
GAAETVRIETGGGDAAAGEAAGDRGGPVAVSDPNPTPDWAASPTIYEVFVRSFAGDTLPT
TFQEIERRVEYLESLGVDALWLTPVLASPTDHGYHVTDYYATAADLGSREAFASLVDACH
DAGIRVVFDLVINHTSRDHPAFQLHSAGVDAYADHYRRTDAAADVTGIDWAEVDGSAAPD
YYFEWGRIPNLNYDSPAVRAWLLDVVDEWAGVVDGFRADVAWGVPHGFWKEVADRVPDDT
LLLDETLPHDPFYGEGEFHRHYDTSLYETLRAVGAGEAPADAVETALARGEWLGFDDPGA
QMRYVENHDEDRYLAEHGREALRAAAAVTFTLPGAPMIYAGQERGNETYRGPIRWHDGDN
ELTAFHRELAALREAEPLLRDGDVRFDGRASEVRVVEGDAERVVAYERTASEGREAGSGD
AGPDDSVLVVVNFAEAPAIVAVPDGVETDLFGGDEGGIGASGANDDDDASDGEIRIEVDA
LAVLR
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
gtgtacgaacccggccccccgagagcgacgagcgtcggtgagtccgtggagttagcgccg
cggtctccggaccccgacgggacgtaccggtggaccgtccgcgacgcgccggcggacagc
gcgctgtcggccggagacggcccggacccggacgcgaccggcccgccgagttcggcgacg
acggtcggctcggaggggtcggcgtcggacgcgaccgctcccgacgggtcgaccgcggcg
ttgcgcgcgggcgagacgaaccgcgacgacgacccggtcgtccacctcgcccccgacgcg
cccgggacctacgtcctcgcgctcgacgcccccgacggcggccaccgccagcgcgtgcgc
gccttccccgacgagcgccgcgaggcggcgatccgcgtgccggccgccgacctcccggcc
gacgaccccgaccgcgtctccctcctgtggccgcggaacgagaaccgcctcgcgctcgac
cgggccgagcgcgacggcgacgactgggtcgcctcggtgcgcgtgccgcccgggaaacac
ggcttcggcctcgtccccgacggcgaccggtcgtcggcgcaccacggggtctgcgaggtg
cccggtccgggccgcccgcggctctcgctcgacgcggcggtcgtcgagaccgacgccccc
gaggcgggcgaccgcctccgcctgaccgccgcggtcgaggccgcgcccaccgtcgacgac
gtggagcgcgggggcgacccggacgcgctcgacgcggcgttcctcgtcgacgaccgcgac
gccgaccccgagacggtcgcggcgatcgagtcgcgagcggacggcgggaccctctcggtc
ccgctcgacgacctccccaactccgtccggatccacgcggtcccgcacggcgagcggtac
ggggccgcggagacggtgcggatcgagacgggcgggggcgacgcggccgccggggaggcg
gccggcgaccgcggcggaccggtcgcggtgagcgacccgaacccgacgcccgactgggcc
gcgtccccgacgatctacgaggtcttcgtgcggtcgttcgcgggcgacacgctgccgacg
acctttcaggaaatcgagcgccgggtcgagtacctggagtccctcggggtcgacgcgctc
tggctcactcccgtcctcgcctcgccgacggaccacggctaccacgtcaccgactactac
gccaccgccgccgacctcggctcccgggaagcgttcgcgtcgctcgtcgacgcctgccac
gacgcgggcatccgggtcgtcttcgatctggtgatcaaccacacctcccgcgaccacccc
gccttccaactccactccgccggggtcgacgcgtacgccgaccactaccgccggaccgac
gcggccgccgacgtgaccgggatcgactgggcggaggtcgacggcagcgcggcgccggac
tactacttcgagtggggccgcattccgaacctcaactacgacagcccggcggtccgcgcg
tggctcctcgacgtggtcgacgagtgggcgggcgtcgtcgacggattccgcgccgacgtg
gcgtggggcgtcccgcacggcttctggaaggaggtcgcggaccgcgtccccgacgacacg
ctcctcctcgacgagacgctcccgcacgacccgttctacggcgagggggagttccaccgc
cactacgacacctcgctgtacgagacgctccgggcggtcggcgcgggcgaggcgccggcc
gacgcggtcgagacggcgctcgcgcgcggcgagtggctcggcttcgacgacccgggcgcg
cagatgcgctacgtcgagaaccacgacgaggaccggtacctcgcggaacacggccgcgag
gccctgcgcgcggccgccgccgtgacgttcacgctgccgggggcgccgatgatctacgcc
ggacaggagcgcggcaacgagacgtaccgggggccgatccggtggcacgacggcgacaac
gaactcaccgcgttccaccgcgaactggccgcgctgcgcgaggccgaaccgctcctccgc
gacggagatgtgcggttcgacggccgagcgagcgaggtgcgcgtcgtcgagggcgacgcc
gagcgcgtggtcgcctacgagcggacggcctcggagggacgggaggcggggagcggggac
gccgggcccgacgactcggtcctcgtcgtcgtcaacttcgccgaggcgccggcgatcgtc
gccgtgcccgacggtgtcgagaccgatctgttcggcggcgacgaagggggaatcggagcg
agcggcgcgaacgacgatgacgacgcgagcgacggcgagatcagaatcgaggtcgacgcg
ctcgcggtcctccgctga
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