Halorubrum sp. 2020YC2: KI388_01450
Help
Entry
KI388_01450 CDS
T08040
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hazz
Halorubrum sp. 2020YC2
Brite
KEGG Orthology (KO) [BR:
hazz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hazz03016
]
KI388_01450 (truD)
Enzymes [BR:
hazz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
KI388_01450 (truD)
Transfer RNA biogenesis [BR:
hazz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KI388_01450 (truD)
Prokaryotic type
KI388_01450 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QWC19671
UniProt:
A0A8E8EXK3
LinkDB
All DBs
Position
complement(279163..280674)
Genome browser
AA seq
503 aa
AA seq
DB search
MPPEHALREAHPTERAVGIEHYVSDADGIGGRLRESPDDFRVRELEAFDAEPLDADTGSY
PELVVRATLRDWDTNDFARRLSDALGVSRERVSWAGTKDKRAVTTQLFTVRGVDAADLPE
VRGADIEALGRAGRSLSFGDLAGNAFEIRVADAVDDAPERVAAAVRDLRAFAGEAEGADG
EETDAANLPVDATVGVPNYFGQQRFGSRRPVTHVVGLAVARDDPREAVRLYAGNPAETEP
DDTRAARDRVDAAFGVDDAVADESVAAEGAAADAERSAADGTGDGDWGACLDAIPGKLRF
ERSMVHRLSDRDVDPDAPPDHEDWWHALEAVPSNLQRLFVNAAQSFLFNRTVSKRLRRGI
PFDRPVAGDVVCFADADAPGELYAPDADRLQRVDADRVDVVSRHCERGRAFVTAPLVGTE
TELGDGEPGAIEREVLADAGIEPGDFALPGEFDSRGTRRAILLRTDLNVTFEAGDPRFAF
ALPSGSYATVLLREFTKRGPLDL
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgccccccgagcacgccctccgcgaggcgcacccgaccgagcgcgcggtcggcatcgag
cactacgtcagcgacgccgacgggatcggtgggcgcctccgcgagtcgcccgatgacttt
cgggtccgggagctggaggcgttcgacgcggagccgctcgacgccgacaccgggagttat
cccgaactggtcgtccgggcgacgctccgcgactgggacacgaacgacttcgcgcgccgg
ctctctgacgcgctcggagtcagccgcgagcgcgtctcgtgggcggggacgaaggacaag
cgcgccgtcaccacccagctgttcaccgtgcgcggcgtcgacgccgcggacctccccgag
gtgcgcggcgccgatatcgaggcgctcgggcgggcggggcggagcctctcgttcggtgac
ctcgccggtaacgcgttcgagatccgggtcgcggacgcggtcgacgacgcccccgagcgc
gtcgcggccgcggtgcgggacctccgggcgttcgcgggcgaggcggaaggcgccgacgga
gaggaaacggacgccgccaacctcccggtcgacgcgaccgtcggcgtcccgaactacttc
ggccagcagcggttcggcagccggcggccggtcacccacgtcgtcggactcgcggtcgcg
cgggacgacccccgcgaggcggtccggctgtacgccggcaacccggcggagacggagccg
gacgatacccgggccgcgcgcgaccgagtcgacgccgcgttcggcgtagacgacgcggtc
gccgacgagagcgtcgcggccgagggcgccgccgcggacgccgagcgctcggccgccgac
ggcacgggcgacggcgactggggagcctgcctcgacgcgatccccgggaagctccggttc
gagcggtcgatggtccaccggctctcggaccgcgacgtcgaccccgacgcgccgcccgac
cacgaggactggtggcacgcgttggaggcggtcccctcgaacctccagcggctgttcgtc
aacgccgcgcagtcgttcctcttcaaccggaccgtcagcaagcggctgcggcgggggatc
ccgttcgaccgccccgtcgccggcgacgtggtctgtttcgcggacgccgacgcgcccggg
gagctgtacgcgcccgacgcggaccggctccagcgtgtcgacgccgaccgggtcgacgtg
gtctcgcggcactgcgagcgcgggcgggcgttcgtcaccgcgccgctcgtcggcacggag
acggagctgggcgacggcgagccgggagcgatagagcgcgaggtcctcgcggacgccggg
atcgagccgggcgacttcgcgctccccggcgagttcgactcccgcgggacccggcgggcg
atcctcctccgcaccgacctcaacgtgacgttcgaggccggagacccccgcttcgcgttc
gcgctcccgagcggatcctacgcgaccgtgctgctccgcgagttcacgaagcgcggcccg
ctcgacctctga
DBGET
integrated database retrieval system
