Halorubrum sp. 2020YC2: KI388_01640
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Entry
KI388_01640 CDS
T08040
Name
(GenBank) PAS domain-containing protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
hazz
Halorubrum sp. 2020YC2
Brite
KEGG Orthology (KO) [BR:
hazz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hazz03000
]
KI388_01640
Transcription factors [BR:
hazz03000
]
Prokaryotic type
Helix-turn-helix
Other families
KI388_01640
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAT
PAS_9
HTH_10
Response_reg
PAS
PAS_3
PAS_4
GAF_3
GAF_2
PAS_8
HTH_20
Sigma70_r4_2
HTH_24
HTH_11
Sigma70_r4
DUF134
MarR_2
HTH_23
HTH_29
Motif
Other DBs
NCBI-ProteinID:
QWC19704
UniProt:
A0A8E8EXP4
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All DBs
Position
complement(327150..329156)
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AA seq
668 aa
AA seq
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MANARALLVHPDEGSDRIETALDAAGFDVTRTDTAASAVAKATTGEYDCVVSEYALAGDD
GVALATAIEEADAGVPVVMFTETDEDGVPEAAFESGVDRFLQKNGSASIEQLVADVTAVS
SGATAPEPRQDVSDHEPSATEVTRAVEDAPIGISISDPDLPDYPLVYVNDAWKEHTGYPV
EEVLGRNPRFLQGPGTEPETVEEIAEAIGNEEEVTVEIRNYRRDGTPFWNELTVAPVYDE
GGDLAHYVGFQNDVSERKEAERLAEERAKKLATERRALDRLLGRVNGLLSEISRILVENW
DPEVIPERVCEVVAGEPGYAGAWIGEVSSATGRFEVGAASGVAVEPGTTLDVEETPAEVR
EAIEAEEPRGGSVERGGGGGPLAPESAGGTQLLVVPLTYGERRFGVLGIYGNGANVLDRR
ERKVCESVGKMIANGLHSVETTRILTTDRVCEIVVEIRDPSSSLTRIADAVGADVEHLGT
TRLDDDAGELYFRADGDDVDLDELAALPLVESMRPVAETNDDVSFAVTVTESPPLAQLAD
HGVVVTDATATADAATVTIEAPPEHNVRSILDVFREEYEGVELRSRVERESRDRTVAEFA
SAVDERLTERQRAALKTAELNGYFEWPRPVDGSEIAERMGITRQTFHQHLRAAERKLVEA
YVDPRSSG
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgctcgcgctctgctcgtccatccggacgaggggagcgatcggatcgagacg
gcgctcgacgcggccggattcgacgtgacgcggacggacaccgcggcgtcggcggtcgcg
aaggcgacgacgggcgagtacgactgcgtcgtcagcgagtacgcgctggccggcgacgac
ggcgtggcgctagcgaccgctatcgaggaggccgacgccggcgtgccggtcgtgatgttc
acagagaccgacgaggacggcgtcccggaggcggccttcgagagcggcgtcgaccggttc
ctccagaagaacggctcggcgtcgatcgagcagctcgtggccgacgtcacggcggtctcc
tccggggccaccgccccggaaccgcgtcaggacgtctccgaccacgagccgtccgcgacg
gaggtgacgcgcgccgtcgaggacgcgccgatcgggatcagcatcagcgaccccgacctc
ccggactacccgctcgtgtacgtcaacgacgcgtggaaggaacacaccggctaccccgtc
gaggaggtgctcgggcggaacccccggttcctccaggggccggggacggagccggagacc
gtcgaggagatcgcggaggcgatcggcaacgaggaggaggtgaccgtcgagatccgcaac
taccgacgcgacgggactccgttctggaacgagctgacggtggcgcccgtctacgacgag
ggcggcgacctggcccactacgtggggttccagaacgacgtcagcgagcggaaggaggcg
gagcggctcgcggaggagcgggcgaagaagctcgcgacggagcgccgggcgctcgacagg
ctcctcggccgagtgaacggcctcctcagcgagatcagtcggatcctcgtcgagaactgg
gacccggaggtgatcccggagcgcgtctgcgaggtggtcgccggcgaacccggatacgcc
ggcgcctggatcggggaggtctcctccgcgaccgggcgcttcgaggtcggcgccgcgagc
ggcgtggcggtcgagccgggaacgacgctcgacgtcgaggagacgccggccgaggtccga
gaggcgatcgaggcggaagagccccgcggcgggtcggtggagcggggcggcgggggcggc
ccgctcgcgccggagtccgccggtgggacgcagctgctcgtcgtcccgctcacgtacggg
gagcgtcggttcggcgtgttggggatctacgggaacggcgcgaacgtcctcgaccgacgg
gagcggaaggtgtgcgagtcggtcggaaagatgatcgccaacggcctccactcggtggag
acgacgcggatcctcaccaccgaccgcgtctgcgagatagtcgttgagatccgggacccg
tcgtcgtccctcacgcggatcgccgacgcggtcggcgcggacgtggaacacctcgggacg
acgcgcctcgacgacgacgccggcgagctgtacttccgggccgacggcgacgacgtggac
ctcgacgagctcgcggcgctgccgctggtcgagtcgatgcgcccggtcgcggagacgaac
gacgacgtcagcttcgccgtcaccgtcaccgagtcgccgccgctcgcgcagctggccgac
cacggcgtcgtcgtcaccgacgcgaccgccacggcggacgcggcgacggtaaccatcgag
gcccccccggagcacaacgtccggtcgatcctcgacgtgttccgcgaggagtacgagggc
gtcgagctccgctcgcgcgtcgagcgcgagagccgcgaccgcaccgtcgcggagttcgcg
tcggcggtcgacgagcggctcaccgagcggcagcgcgcggcgctgaagacggccgagctg
aacgggtacttcgagtggccgcggccggtcgacggctccgagatcgcggagcggatgggg
atcacccggcagacgttccatcagcacctccgcgcggccgagcgcaagctggtcgaggcg
tacgtggacccccggtcgagcggatga
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