KEGG   Halorubrum sp. 2020YC2: KI388_01640
Entry
KI388_01640       CDS       T08040                                 
Name
(GenBank) PAS domain-containing protein
  KO
K06930  HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
hazz  Halorubrum sp. 2020YC2
Brite
KEGG Orthology (KO) [BR:hazz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hazz03000]
    KI388_01640
Transcription factors [BR:hazz03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    KI388_01640
SSDB
Motif
Pfam: BAT PAS_9 HTH_10 Response_reg PAS PAS_3 PAS_4 GAF_3 GAF_2 PAS_8 HTH_20 Sigma70_r4_2 HTH_24 HTH_11 Sigma70_r4 DUF134 MarR_2 HTH_23 HTH_29
Other DBs
NCBI-ProteinID: QWC19704
UniProt: A0A8E8EXP4
LinkDB
Position
complement(327150..329156)
AA seq 668 aa
MANARALLVHPDEGSDRIETALDAAGFDVTRTDTAASAVAKATTGEYDCVVSEYALAGDD
GVALATAIEEADAGVPVVMFTETDEDGVPEAAFESGVDRFLQKNGSASIEQLVADVTAVS
SGATAPEPRQDVSDHEPSATEVTRAVEDAPIGISISDPDLPDYPLVYVNDAWKEHTGYPV
EEVLGRNPRFLQGPGTEPETVEEIAEAIGNEEEVTVEIRNYRRDGTPFWNELTVAPVYDE
GGDLAHYVGFQNDVSERKEAERLAEERAKKLATERRALDRLLGRVNGLLSEISRILVENW
DPEVIPERVCEVVAGEPGYAGAWIGEVSSATGRFEVGAASGVAVEPGTTLDVEETPAEVR
EAIEAEEPRGGSVERGGGGGPLAPESAGGTQLLVVPLTYGERRFGVLGIYGNGANVLDRR
ERKVCESVGKMIANGLHSVETTRILTTDRVCEIVVEIRDPSSSLTRIADAVGADVEHLGT
TRLDDDAGELYFRADGDDVDLDELAALPLVESMRPVAETNDDVSFAVTVTESPPLAQLAD
HGVVVTDATATADAATVTIEAPPEHNVRSILDVFREEYEGVELRSRVERESRDRTVAEFA
SAVDERLTERQRAALKTAELNGYFEWPRPVDGSEIAERMGITRQTFHQHLRAAERKLVEA
YVDPRSSG
NT seq 2007 nt   +upstreamnt  +downstreamnt
atggcgaacgctcgcgctctgctcgtccatccggacgaggggagcgatcggatcgagacg
gcgctcgacgcggccggattcgacgtgacgcggacggacaccgcggcgtcggcggtcgcg
aaggcgacgacgggcgagtacgactgcgtcgtcagcgagtacgcgctggccggcgacgac
ggcgtggcgctagcgaccgctatcgaggaggccgacgccggcgtgccggtcgtgatgttc
acagagaccgacgaggacggcgtcccggaggcggccttcgagagcggcgtcgaccggttc
ctccagaagaacggctcggcgtcgatcgagcagctcgtggccgacgtcacggcggtctcc
tccggggccaccgccccggaaccgcgtcaggacgtctccgaccacgagccgtccgcgacg
gaggtgacgcgcgccgtcgaggacgcgccgatcgggatcagcatcagcgaccccgacctc
ccggactacccgctcgtgtacgtcaacgacgcgtggaaggaacacaccggctaccccgtc
gaggaggtgctcgggcggaacccccggttcctccaggggccggggacggagccggagacc
gtcgaggagatcgcggaggcgatcggcaacgaggaggaggtgaccgtcgagatccgcaac
taccgacgcgacgggactccgttctggaacgagctgacggtggcgcccgtctacgacgag
ggcggcgacctggcccactacgtggggttccagaacgacgtcagcgagcggaaggaggcg
gagcggctcgcggaggagcgggcgaagaagctcgcgacggagcgccgggcgctcgacagg
ctcctcggccgagtgaacggcctcctcagcgagatcagtcggatcctcgtcgagaactgg
gacccggaggtgatcccggagcgcgtctgcgaggtggtcgccggcgaacccggatacgcc
ggcgcctggatcggggaggtctcctccgcgaccgggcgcttcgaggtcggcgccgcgagc
ggcgtggcggtcgagccgggaacgacgctcgacgtcgaggagacgccggccgaggtccga
gaggcgatcgaggcggaagagccccgcggcgggtcggtggagcggggcggcgggggcggc
ccgctcgcgccggagtccgccggtgggacgcagctgctcgtcgtcccgctcacgtacggg
gagcgtcggttcggcgtgttggggatctacgggaacggcgcgaacgtcctcgaccgacgg
gagcggaaggtgtgcgagtcggtcggaaagatgatcgccaacggcctccactcggtggag
acgacgcggatcctcaccaccgaccgcgtctgcgagatagtcgttgagatccgggacccg
tcgtcgtccctcacgcggatcgccgacgcggtcggcgcggacgtggaacacctcgggacg
acgcgcctcgacgacgacgccggcgagctgtacttccgggccgacggcgacgacgtggac
ctcgacgagctcgcggcgctgccgctggtcgagtcgatgcgcccggtcgcggagacgaac
gacgacgtcagcttcgccgtcaccgtcaccgagtcgccgccgctcgcgcagctggccgac
cacggcgtcgtcgtcaccgacgcgaccgccacggcggacgcggcgacggtaaccatcgag
gcccccccggagcacaacgtccggtcgatcctcgacgtgttccgcgaggagtacgagggc
gtcgagctccgctcgcgcgtcgagcgcgagagccgcgaccgcaccgtcgcggagttcgcg
tcggcggtcgacgagcggctcaccgagcggcagcgcgcggcgctgaagacggccgagctg
aacgggtacttcgagtggccgcggccggtcgacggctccgagatcgcggagcggatgggg
atcacccggcagacgttccatcagcacctccgcgcggccgagcgcaagctggtcgaggcg
tacgtggacccccggtcgagcggatga

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