Halorubrum sp. 2020YC2: KI388_02150
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Entry
KI388_02150 CDS
T08040
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
hazz
Halorubrum sp. 2020YC2
Pathway
hazz00300
Lysine biosynthesis
hazz00470
D-Amino acid metabolism
hazz01100
Metabolic pathways
hazz01110
Biosynthesis of secondary metabolites
hazz01120
Microbial metabolism in diverse environments
hazz01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
hazz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KI388_02150 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KI388_02150 (dapF)
Enzymes [BR:
hazz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
KI388_02150 (dapF)
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
QWC19798
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All DBs
Position
complement(431111..432076)
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AA seq
321 aa
AA seq
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MSVYAVPVEKYHGTGNDFLVVDAAAENVGDRAAFARAYCDRETGVDGGDFDAEPPRDAGA
DRDGETGRRGADGVLFLSIEERFNPTRVVMTLVQPDGSTATMCGNGARVVARWAHDRTGD
REFMIDTQAGTRRATVNADATAATIEMGQPTFGPRRVPVAREGPLAGEPLVDESVEGLTV
TAANTGVPHAVAFVDGGRNDPDGIDAVDLDDVAPPVRHADVFPEGANVNLAAVVDDGSGG
GPAVLDQRTFERGVEGETRSCGTGAVAVVAAARRLGLIDGDSAVSRPPGGELEITVPDAG
HATLTGPVAHEFSGALPADPR
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtctacgccgtcccggtcgagaagtaccacggcacgggcaacgacttcctcgtc
gtcgacgcggccgccgagaacgtcggggaccgcgcggcgttcgcgcgagcgtactgcgac
cgcgagacgggcgtcgacgggggagatttcgacgccgagccgccgcgcgacgccggcgcg
gaccgcgacggggaaacgggtcgacgcggcgccgacggcgtcctctttttgagcatcgag
gagcggttcaaccccacccgcgtcgtgatgacgctggtccagcccgacggttcgacggcg
acgatgtgcggcaacggggcccgcgtcgtcgcgcggtgggcccacgaccggaccggcgac
cgcgagttcatgatcgacacgcaggccggcacccggcgcgccaccgtgaacgcggacgcg
accgcggccaccatcgagatgggccagccgacgttcggcccccggcgggtcccggtcgct
cgcgagggacccctcgccggcgagccgctggtcgacgagtccgtcgaagggctgaccgtc
accgccgccaacaccggcgtcccgcacgcggtcgcgttcgtcgacggcggccgcaacgac
cccgacggaatcgacgcggtcgacctcgacgacgtggccccgccggtccgccacgccgac
gtcttcccggagggcgcgaacgtgaacctcgcggcggtcgtcgacgacgggagcggcggg
ggcccggcggtcctcgatcagcgcaccttcgagcgcggcgtcgagggcgagacgcgctcc
tgcggcaccggcgcggtcgcggtcgtcgcggccgcccgccggctgggactgatagacggc
gactcggcggtgagccgacccccgggcggcgaactggagatcaccgtccccgacgcgggc
cacgccacgctgaccggccccgtcgcccacgagttctcgggggcgctccccgccgacccg
cgatga
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