Halorubrum sp. 2020YC2: KI388_03465
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Entry
KI388_03465 CDS
T08040
Name
(GenBank) squalene/phytoene synthase family protein
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
hazz
Halorubrum sp. 2020YC2
Pathway
hazz00100
Steroid biosynthesis
hazz00909
Sesquiterpenoid and triterpenoid biosynthesis
hazz01100
Metabolic pathways
hazz01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
hazz00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
KI388_03465
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
KI388_03465
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hazz01006
]
KI388_03465
Enzymes [BR:
hazz01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
KI388_03465
Prenyltransferases [BR:
hazz01006
]
Terpene biosynthesis
Squalene/phytoene synthase
KI388_03465
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
DUF7691
Motif
Other DBs
NCBI-ProteinID:
QWC20030
UniProt:
A0A8E8EY14
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All DBs
Position
complement(706223..707284)
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AA seq
353 aa
AA seq
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MSGREHGPGEADLAWCHEAVQGVSRTFALTVDVLEEPMASQICVGYLLCRVADTVEDAGH
IPPDAQSDVLRTYRRAIDPDDATEISEFREAVDEWLPAERDDDWTVVAEAPTIAATFGEL
DPEAQAAIVPPVLEMVDGMAMFVDRHATEGGLRIDDRDELEQYCYYAAGTVGNLITNLLT
RGDVGEERAERLRETAEEFGLLLQLVNVSKDVYDDYTEENNVYLPAEWLEAEGVDQERVV
HPENRESSARVVDRTADYARSFLDDAQAYLETMPLSNGNTMEAWTVPYLLAVGTLRELGS
RPEDALTETGVKVSRQEVFAVMSAASDVGRDSLAELRQTIARTPFHRAVGSAD
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgagcggacgagaacacggccccggcgaggccgacctcgcgtggtgtcacgaggcggtc
cagggggtctcgcggaccttcgcgctgaccgtcgacgtgttagaggagccgatggcctcg
cagatctgcgtcggttacctcctctgtcgcgtcgccgacacggtcgaggacgccggccac
atcccgccggacgcccagagcgacgtgctccggacgtaccggcgagcgatcgatccggac
gacgccaccgagatcagcgagttccgcgaggcggtcgacgagtggctgcccgccgagcgc
gacgacgactggaccgtcgtcgcggaggcgcccacgatcgccgcgacgttcggggagctc
gacccggaggcgcaggcggcgatcgtcccgccggtgttggagatggtcgacgggatggcg
atgttcgtcgaccgccacgccaccgagggcggcctccgtatcgacgaccgcgacgagctg
gagcagtactgctactacgcggccggcaccgtcggcaacctcatcacgaacctgctcacc
cgcggcgacgtgggcgaggagcgcgcggagcgcctgcgcgagaccgccgaggagttcggc
ctcctcctccagctcgtgaacgtctcgaaggacgtctacgacgactacaccgaggagaac
aacgtctacctccccgccgagtggctcgaagcggagggcgtcgaccaggagcgcgtcgtc
caccccgagaaccgcgagtcgtccgcgcgcgtcgtcgaccgcaccgccgactacgcccgc
tcgttcctcgacgacgcgcaggcgtacttggagacgatgccgctctcgaacggaaacacg
atggaggcgtggacggtgccgtacctgctcgcggtcggcactctccgcgaactcgggagc
cgcccggaggacgcgctcaccgagacgggcgtgaaggtgtccagacaggaggtgttcgcg
gtgatgtcagccgcgagcgacgtgggccgcgactcgctggcggaactgcgacagactatc
gcgcggacccccttccaccgcgcggtcggctcggcggactga
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