Halorubrum sp. 2020YC2: KI388_05850
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Entry
KI388_05850 CDS
T08040
Name
(GenBank) tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
hazz
Halorubrum sp. 2020YC2
Brite
KEGG Orthology (KO) [BR:
hazz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hazz03016
]
KI388_05850
Enzymes [BR:
hazz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
KI388_05850
Transfer RNA biogenesis [BR:
hazz03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
KI388_05850
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
SPL
Motif
Other DBs
NCBI-ProteinID:
QWC20464
UniProt:
A0A8E8EYT4
LinkDB
All DBs
Position
complement(1193029..1194351)
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AA seq
440 aa
AA seq
DB search
MATYHIETYGCSSNRGESREIERALRDGGHRPADGPEDADVAILNTCTVVEKTERNMLRR
AEELSETTAELVVTGCMALAQGEMFAEADVDAEVLHWDEVPTYVLNGECPTVTPDAEPVL
DGVVGILPIARGCMSNCSYCITKFATGRVDSPTIEENVEKARALVHAGAKEIRVTGQDTG
VYGWDNGDRKLPELLDRICDIDGEFRVRLGMANPGGIHGIHEELADVFAENEELYDFIHA
PVQSGSDEVLEDMRRQHRVEKFREVVETFDERIDHWTLSTDFIVGFPTEDEADHERSMDL
LAEVRPEKINVTRFSKRPGTDAADMKGLGGTIKKERSKAMSELKMEVVGEAYESMVGETF
EVLVVEEGTGDSVKCRDGAYRQIIVQGAGDRGVEVGDFLTVEVTGHNTVYAFGKPVAERD
SADGDSVGRDDRPESATSSA
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtaccacatcgaaacctacggctgtagctcgaaccggggagagagccgggag
atcgagcgcgccctccgcgacggggggcaccgcccggccgacggcccggaagacgcggac
gtcgccatcctcaacacctgtaccgtcgtcgagaagaccgaacgcaacatgctccgccgc
gccgaggagctgtcggagacgaccgccgaactcgtcgtcaccggctgtatggcgctcgcg
cagggcgagatgttcgcggaggccgacgtcgacgccgaggtcctccattgggacgaggtc
ccgacctacgtgctcaacggcgagtgcccgacggtcacgcccgacgccgagccggtcttg
gacggcgtcgtcggcatcctccccatcgcgcgcggctgtatgagcaactgctcgtactgt
atcaccaagttcgccaccggccgcgtcgactccccgacgatcgaggagaacgtcgagaag
gcccgcgcgctggtccacgccggcgcgaaggagatccgggtcaccgggcaggacaccggc
gtctacggctgggacaacggcgaccggaagctcccggagctgctcgaccggatctgcgac
atcgacggcgagttccgggtccggctggggatggcgaaccccggcgggatccacgggatc
cacgaggagctggccgacgtgttcgcggaaaacgaggagctgtacgacttcattcacgcc
cccgttcagtccggctccgacgaggtgctcgaagacatgcgccggcaacaccgcgtcgag
aagttccgcgaggtcgtggagacgttcgacgagcggatcgaccactggacgctctcgacc
gacttcatcgtcggcttccccaccgaggacgaggcggaccacgagcgctcgatggacctc
ctcgcggaggtccggcccgagaagatcaacgtcacccgcttctcgaagcgccccggtacc
gacgccgccgacatgaaagggctcggcgggacgatcaagaaggagcgctcgaaggcgatg
tcagagctgaagatggaggtcgtcggggaggcgtacgagtcgatggtcggagagaccttc
gaggtgctcgtcgtcgaggaggggaccggcgactccgtgaagtgccgcgacggcgcctac
cgacagatcatcgtccagggcgcgggcgaccgcggggtcgaggtgggcgacttcctcacg
gtcgaggtgaccggccacaacacggtgtacgcgttcgggaagcccgtggcggagcgagac
tcggccgacggcgactccgtcgggcgcgacgaccggccggagtccgcgacctcgtcggcg
tag
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