Halorubrum sp. 2020YC2: KI388_06575
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Entry
KI388_06575 CDS
T08040
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hazz
Halorubrum sp. 2020YC2
Pathway
hazz03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hazz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KI388_06575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hazz03021
]
KI388_06575
Transcription machinery [BR:
hazz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
KI388_06575
Prokaryotic type
Archaeal type
TFB
KI388_06575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Trm112p
Zn_ribbon_LysW
Zn_ribbon_tTFIIB
Cas12f1-like_TNB
DZR
Sigma70_r4
Anti-TRAP
A2L_zn_ribbon
GFA
Zn_ribbon_Nudix
Auto_anti-p27
DZR_2
DUF8054_C
Cyclin_N
DUF7129
Motif
Other DBs
NCBI-ProteinID:
QWC20599
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All DBs
Position
1336979..1338055
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AA seq
358 aa
AA seq
DB search
MTETDTYSGGGTERERLTDSADETGSGERTRTRATDSTTEETASAEETANAEETASERER
STTCPECGGQLATDTEHGETVCTDCGLVVEEDSVDRGPEWRAFNSGERDSKSRVGAPTTN
MMHDKGLSTNIGWQDKDAYGKSLSGRQRRRMQRLRTWNERFRTRDSKERNLKQALGEIDR
MASALGLPDNVRETASVIYRRALSENLLPGRSIEGVATAALYAAARQVGNPRSLDEFTAV
SRVEKMELTRTYRYVVRELKLEVKPADPTSYVPRFASRLDLSDEAERRARELLDDAANAG
ITSGKSPVGLAAAAVYAAALLSNEKVTQSQVSDVADVSEVTIRNRYKELLEASGDVSA
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgacagagacagacacctacagcggcggcggtacggagcgagaacgactgactgactcg
gccgacgagaccggaagcggggagcgcacgcgaacgagggcgacggactcaacgaccgag
gagacggcgagcgccgaggaaacggcgaacgccgaggagacggcgagcgagcgcgagcgg
agcacgacctgtcccgagtgcggcggccagttagcgacggacacggaacacggcgagacc
gtctgtaccgactgcggactcgtcgtcgaggaggactcggtcgaccgcggaccggagtgg
cgagcgttcaactccggcgagcgggacagcaagtcgcgggtcggggccccgacgacgaac
atgatgcacgacaaggggctctcgacgaacatcggttggcaggataaagacgcctacggt
aagtcgctctccgggcggcagcggcgccggatgcagcggctgcggacgtggaacgagcgg
ttccgcacccgcgactccaaggagcgcaacctcaagcaggcgctcggtgagatcgaccgc
atggccagtgcactcggcctcccggacaacgtccgcgagaccgctagcgtcatctaccgc
cgcgcgctgagcgagaacctcctccccggccgctccatcgagggcgtcgcgaccgcggcg
ctgtacgcggccgccagacaggtggggaacccccggagcctcgacgagttcacggcggtc
tcgcgggtcgagaagatggaactcacgcggacgtaccgctacgtcgtccgcgagctgaag
ctggaggtgaagccggcggacccgacgagctacgtcccgcggttcgcctcgcggctcgac
ctctcggacgaggccgagcgccgggcccgcgaactgctcgacgacgccgcgaacgcgggg
atcacgagcggcaagtcgcccgtgggactcgccgccgccgcggtgtacgccgccgccctg
ctgtcaaacgagaaggtgacccagagccaggtctccgacgtggccgacgtgtccgaggtc
actatccggaaccggtacaaggagctgctcgaagcgagcggcgacgtgtccgcctga
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integrated database retrieval system
