Halorubrum sp. 2020YC2: KI388_06595
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Entry
KI388_06595 CDS
T08040
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
hazz
Halorubrum sp. 2020YC2
Pathway
hazz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hazz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KI388_06595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hazz03400
]
KI388_06595
Enzymes [BR:
hazz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KI388_06595
DNA repair and recombination proteins [BR:
hazz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KI388_06595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
OGG_N
Motif
Other DBs
NCBI-ProteinID:
QWC20603
UniProt:
A0A8E8KBJ2
LinkDB
All DBs
Position
complement(1339355..1340281)
Genome browser
AA seq
308 aa
AA seq
DB search
MERGAIDVGDLAGPFDLQATLESGQSYLWNRADGDTYDELHARGGDAWYETVVDPVPGVT
EDRVPVRVRQEGGVHDGTLRWESSIDAEPLLTHLLRLDDDLNAVLDATPDLPLLERAYDA
YEGMRLTRDPVFPCLVSFICSAQMRVARIHGMQRRLRETYGDAVALDGETYRAFPTPEQL
AARTEDELRDLSLGYRAPYVRRTAEMVASGEADPLEAADLPYEEARESLTRFVGVGEKVA
DCVLLFSLGFLEAVPLDTWIRTTIEEYYPDCDRGSYAATSRAIRERFGGEFAGYAQTYVF
YYLRAGGE
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggaacgcggggcgatcgacgtcggcgatctggctggaccgttcgaccttcaggcgacc
ctcgagagcgggcagagctacctctggaaccgcgctgacggcgatacgtacgacgagctc
cacgcgcgcggcggcgacgcgtggtacgagacggtcgtcgacccggtccccggcgtgacc
gaagaccgggtcccggtccgagttcgacaggagggcggcgtccacgacgggaccctccgc
tgggagtcgtcgatcgacgccgagccgctgttgacgcacctgttgcgactcgacgacgac
ctcaacgcggtcttggacgccacgccagacctcccgctcctcgaacgcgcgtacgacgcc
tacgaggggatgcggctgacccgcgaccccgtcttcccctgtctggtctcgttcatctgc
tcggcacagatgcgagtcgcccgcatccacggcatgcagcgtcggcttcgggagacgtac
ggcgacgcggtcgcgctcgacggcgagacgtaccgggcctttccgacgcccgagcaactg
gccgcccgcacggaggacgaactccgcgacctctctctgggataccgcgcgccgtacgtc
cggcgcacggccgagatggtcgcgagcggcgaggcggaccccctggaggcggccgacctg
ccgtacgaggaggcccgcgagtcgctcacgcggttcgtcggcgtcggggagaaggtcgcg
gactgcgtgctgctgttctctttaggcttcctcgaggcggtgccgctcgacacctggatt
cgaaccaccatcgaagagtactaccccgactgcgaccgcgggagctacgcggcgacctcc
cgggcgatccgtgagcggttcggcggcgagttcgccggctacgcgcagacgtacgtgttc
tactacctccgcgccggcggcgagtga
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