Halorubrum sp. 2020YC2: KI388_06645
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Entry
KI388_06645 CDS
T08040
Name
(GenBank) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
hazz
Halorubrum sp. 2020YC2
Pathway
hazz03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hazz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KI388_06645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hazz03000
]
KI388_06645
03021 Transcription machinery [BR:
hazz03021
]
KI388_06645
Transcription factors [BR:
hazz03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
KI388_06645
Transcription machinery [BR:
hazz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
KI388_06645
RNA polymerase III system
TFIIIB
KI388_06645
RNA polymerase I system
SL1/TIF-1B
KI388_06645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-ProteinID:
QWC20608
LinkDB
All DBs
Position
1350809..1351369
Genome browser
AA seq
186 aa
AA seq
DB search
MTNPADSIEIQNVVASTGIGQELDLEALAEDLPGADFNPDNFPGLVYRTQEPKAAALIFR
SGKIVCTGAKSIDDVHEALGIIFEKLRGLQIPVEDDPEITVQNIVSSADLGHNLNLNALA
IGLGLEDVEYEPEQFPGLVYRMDEPEVVILLFGSGKIVITGGKRTDDAEEAVEEIVERIE
GLGLLG
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaccctgcagactcgatcgagattcagaacgttgttgcatcgacgggtatcggt
caggagctcgatttggaggcgcttgccgaggacctcccaggcgcggatttcaaccccgac
aacttccccggtctcgtgtaccgtacccaggagccgaaggctgccgcgctcatcttccgc
tcggggaagatcgtctgtacgggcgcgaagagcatcgatgacgtccacgaagcgctcggc
atcatcttcgagaaactccgcggcctccagatccccgtcgaggacgatccggaaatcact
gtccagaacatcgtgtccagcgcagacctcgggcacaacctcaacctcaacgccctcgcg
atcggtctggggctcgaagacgtggagtacgaaccggagcagttccccgggctcgtctac
cggatggacgaacccgaagtcgtcattcttctcttcgggagcggaaagatcgttattacg
ggcggaaaacgcaccgatgacgccgaagaagcggtcgaagagatcgtcgaacgcatcgaa
ggtctcggcctcctcggctga
DBGET
integrated database retrieval system
