Halorubrum sp. 2020YC2: KI388_06730
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Entry
KI388_06730 CDS
T08040
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hazz
Halorubrum sp. 2020YC2
Brite
KEGG Orthology (KO) [BR:
hazz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hazz03016
]
KI388_06730 (truA)
Enzymes [BR:
hazz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
KI388_06730 (truA)
Transfer RNA biogenesis [BR:
hazz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KI388_06730 (truA)
Prokaryotic type
KI388_06730 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
GLTSCR1
Motif
Other DBs
NCBI-ProteinID:
QWC20622
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All DBs
Position
1366234..1367163
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AA seq
309 aa
AA seq
DB search
MTGDPNDSTGRETVTRAFRVAYDGREYAGFQRQPHAHTVADALLGALADHGVVEPGEGPT
HATPPGYAAAGRTDAGVSAVAQTVAFEAPTWLTPRAFNGHLPGSVRVWAAADVEDGFHAT
HDAVRRTYRYHLYAPSADAADAPADPARRDPEHAVDDDRFRAALARFDGEHDFHNLTTDE
TGTVRDLDARAVREGDTLVVELAADGFPRALVRRVVAAARAVGRGTADLAWIDRLLAAEP
VPGERGVGPAPPEPLVLWDVTYPEAAFAVDPEAAESARVAFGERHRDARHAATATGAVRD
RLFSAIKER
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
gtgacgggcgacccgaacgactcgaccgggagggagaccgtcacccgcgccttccgggtc
gcgtacgacggccgggagtacgccggcttccagcgccagccgcacgcgcacacggtcgcg
gacgcgctcctcggcgcgctggccgatcacggggtcgtcgaacccggcgagggaccgacc
cacgccacgccccccggctacgccgccgccggccggaccgacgcgggggtctcggcggtg
gcccagaccgtcgcgttcgaggcgccgacgtggctcacgccgcgcgcgttcaacggccac
ctgccggggtcggtccgcgtgtgggccgccgccgacgtcgaggacgggttccacgcgacg
cacgacgcggtccggcggacgtaccgataccacctctacgcgccgagcgccgacgccgcg
gacgcgcccgcagacccggcgcgcagagacccggaacacgcggtcgacgacgaccggttc
cgggcggcgctcgcgcggttcgacggcgaacacgacttccacaacctgacgaccgacgag
acggggacggtccgcgacctcgacgcgcgggcggtccgcgagggtgacacgctcgtcgtc
gaactcgccgcggacggcttcccccgcgcgctcgtgcggcgtgtcgtcgccgcggcccgc
gccgtcggtcgcgggacggcggacctcgcgtggatcgaccggctgctcgccgcggaaccg
gttcccggcgagcgcggcgtcgggccggcgcccccggagccgctcgtgctgtgggacgtg
acctaccccgaagcggcgttcgcggtcgaccccgaggccgcggagagcgctcgcgtcgct
ttcggggagcgccaccgggacgcccgccacgccgcgaccgccaccggcgcggtgcgcgac
aggctgttctcggccatcaaggaacggtag
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