Halorubrum sp. 2020YC2: KI388_07330
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Entry
KI388_07330 CDS
T08040
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hazz
Halorubrum sp. 2020YC2
Brite
KEGG Orthology (KO) [BR:
hazz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hazz03400
]
KI388_07330
DNA repair and recombination proteins [BR:
hazz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KI388_07330
Archaeal homologous recombinant proteins
KI388_07330
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
CCDC39
AAA_15
CENP-F_leu_zip
Mua
AAA_13
ABC_tran_CTD
HH_AprE
SMC_N
THOC7
FKBP15
Spike_torovirin
AAA_27
CEP135_TSGA10_CC
DUF7121
Tropomyosin
DUF1664
AAA_29
CCDC18_1st
CEP89
Rod_CreS
SPC25_N
DUF4200
ATG16
DUF724
Fib_alpha
GAS
T1-F
DUF7575
DUF8260
ABC_tran
CCDC89
TsaE
Inhibitor_I9
KIF21A
CC_Bre1
Phage_scaffold
MscS_porin
TMF_DNA_bd
ATG14
DUF4407
KIF21A_4th
Fez1
NACHT
Baculo_PEP_C
Motif
Other DBs
NCBI-ProteinID:
QWC20721
LinkDB
All DBs
Position
1478092..1481400
Genome browser
AA seq
1102 aa
AA seq
DB search
MKVTDLHLQNIRSYEDESIAFPEGTMLVHGENGAGKTTLLMGIFGGLFLSNIRNVGSNDF
NLDDIVRRGTREGEIVLTFEVAETPYTVTWSIDTEGQNSAELDSPALSEPISGIRDVSSE
VVDVVGMDEDSFSRSVYVQQGEVDSLFDDDARAELIDDLLGLDRIDRYELRAKGARRAMG
RIASENEQSAENHRETIDEQFDHDIEGYEAAIADKEAEISEQQAEIEDVEEFLQELRDAK
EDVEQRLENHDELQTELEEAEDERQDLIEERAAKQREIEEAETAIAEAEAEIDTCRDGID
EKQEALDQLDDPSTTDPIDADLSTEERAEEALSAAQNAVETAQIEHTDREGTLGQAEAER
DRLIDERDALREEAEELEADLDHLLAEKGDIVDDVEAAEEEVTAAVEKREAVTTEFLPDD
SCPDTITDETREAVDTRIEALTTEKNELSEERAAAEASLDAAETTREEAQAAVTDAHDEI
DQLSDDLAEVESELEDAHEAKSEAENQFEEDLETLDADLDTVDLSVSGDTLQSLIDERIP
EAKGEVQDAIETANTTVTELEARKTTLEEDREELQALDGVATCPKCGQDVDPSHVEDELA
DIDAELTEVEAELAEAREERDALVDRRDALDDCREDAIELRGFRDDTVNLKAERVSTLED
ERESLQDDHAEAESELTDAEAKLKSAESEVDDLEHTIADLESDIESLEAEIEDGKEVVAA
FETVEKRRQERDDLADELADLEAEQEELEAEIADANAELDEYDEQIEAQRDAVAEADAAL
EDAQQAVDTATEQRELVADVVDAYEAIAELETTIKGHQKDIGHAQDTIETLNGQIADVEE
EIDALSDELGSIDVEAQREQLETATQKIEEREATLEELTAELDSLKEARTVLVNDLENLE
YFRDQLALEEEKRKWAEERSDEFDRMMAVYRSTKADLREQYLAYINQYTNDIFSDIYKNS
SYQQVRILEEGPDGTPYAIQLLRDDGTLEHPSNASGGERAIVNLALRAGIYKLIAEMREG
DSGRLPPFILDEPTTFLDKGHIGRLEQMLDSISEWDVPQVIVVSHDERLIQGAEHEIEVS
IDEDTNASRVDVHRGGRILGDE
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcactgatctacacctacagaacatccggagctacgaggacgagtcgatcgcg
ttccccgagggaacgatgctcgtccatggggagaacggtgccgggaagacgacactgctg
atggggattttcggcggactcttcctctcgaatatccggaatgtcgggtcgaacgatttc
aatctcgacgatatcgtcaggcgaggtacgagagaaggcgaaatcgtgttgacatttgag
gtggcagagacaccgtacaccgtcacgtggtcgatcgatacggaggggcaaaacagcgca
gagcttgactcgcccgcactctcggaacccatctcagggattcgtgatgtcagctcggaa
gtcgtcgatgtggtcgggatggacgaagacagtttctcccggtcagtgtacgtacagcag
ggtgaagtcgatagcctgtttgacgacgacgctcgggcggaactcatcgatgacttgctc
ggactcgatcggatcgatcgctacgaactccgggcaaagggtgcccgtcgtgcgatgggt
cgcattgcgagtgagaacgaacaatctgctgagaatcatcgtgagaccatcgacgagcag
ttcgatcatgacatcgagggctacgaggctgccatcgccgacaaagaagcggagatctcg
gagcaacaggcagagatcgaggacgtagaggagttcctacaggagcttcgagacgcgaaa
gaggacgtcgagcaacgacttgagaatcacgacgagttgcagaccgagcttgaagaagcc
gaagatgagcgccaggacctcatcgaagagcgagcggcgaaacaacgggaaattgaggag
gccgagacagcaattgcggaggctgaagcggagatcgatacgtgccgcgacggtatcgac
gagaagcaggaggcactcgaccaactcgatgacccatcgacaacagacccgatagatgcc
gatctgtcgacggaagagcgtgctgaggaggcgctgagtgccgcacaaaacgcggtcgag
acagcacagatcgaacacacagatcgagagggaacgctcggccaggcggaggcagagcga
gaccgactcatcgacgaacgagatgcgttacgcgaggaagccgaagagctcgaagcggat
cttgaccacctgctcgcggagaaaggggacatcgtggatgacgttgaggctgcggaggaa
gaggttacagctgccgtcgagaagcgagaggctgtaaccactgagttcctcccagacgac
tcctgtccggacacaatcactgacgagacgcgtgaggccgtcgacacacgcattgaggcg
ttgacgacagagaaaaatgaattgtcggaagagcgtgccgctgctgaggcgtctctcgac
gcagccgaaacgacacgcgaggaagcgcaggcggctgtcacggacgcacatgacgagata
gaccagttgtcggacgacctcgcagaggtggagtcggaactcgaagatgcccatgaggcg
aaatcggaggcagaaaatcaattcgaggaagatcttgagactctcgatgccgacctcgac
accgttgacttgagcgtatctggcgacacgctacagagcctcatcgacgaacggatcccg
gaagcgaaaggggaagtacaggacgcaatcgagacggcgaacacgacggtcaccgaactc
gaagcgcgcaaaacgacgcttgaggaggaccgcgaggagctacaggcactcgatggagta
gcgacgtgcccgaagtgtggccaagacgtcgatccgtctcacgtcgaagacgagctcgcg
gatatcgacgccgaactcactgaggtagaagccgaactggccgaggcgagagaagaacgc
gatgcgctcgtcgaccggcgagacgctctcgacgattgtcgtgaagatgcgattgaactg
cggggcttccgtgacgacacggtcaacctaaaagctgagcgcgtgagtacgctcgaagac
gagcgtgagtcgttacaggacgatcatgccgaggcagagtccgagctcaccgacgctgag
gccaagctcaaatctgcggagtcggaggtcgacgacctcgaacacacgatcgctgacctc
gaatcggatattgagtcgctcgaagcggagattgaggacggcaaagaggttgtggcggcc
ttcgaaaccgttgagaaacgtcggcaggaacgggatgaccttgcggatgagcttgctgat
ctcgaagctgaacaagaagaactcgaagcggaaatcgctgacgcgaacgcagagctcgac
gaatacgacgagcagattgaagcccaacgcgacgcagttgctgaggccgacgcagccctc
gaagacgctcagcaagcagttgacaccgcaacggaacagcgcgaactcgttgccgacgtg
gttgacgcatacgaagcgatcgccgagttggagaccacgatcaaaggccaccagaaggat
atcgggcacgcacaggacacgatcgagaccctcaacgggcagattgctgacgttgaggag
gaaatcgatgcgctcagcgatgaactcggatcgatcgacgtcgaagcccagcgagaacag
ttggaaacggcgacacagaagatcgaggagcgcgaggccacgcttgaggaactgaccgcg
gaactagactcgctcaaggaagcgcggacagtgcttgtaaacgaccttgagaatctagag
tacttccgcgaccagctcgcactcgaggaagaaaagcgcaagtgggccgaagagcggtct
gacgagttcgatcgaatgatggcggtgtatcgaagtacgaaggcggacctccgtgagcag
tacctcgcctacatcaaccaatacacgaacgacatcttcagcgacatctacaagaacagt
agctaccagcaggtgcgcattcttgaggaggggcccgatggcacgccatacgcgattcag
ttgcttcgtgacgacgggacgctcgaacacccgagtaacgccagcggcggggaacgtgcc
atcgtcaatctcgcgctccgagccggcatctacaaactcatcgccgagatgcgcgagggc
gacagcggtcgcctcccgccgttcatcctcgatgagccgacgacgttcctcgataagggc
cacatcgggcgtctcgaacagatgcttgacagcatctccgagtgggacgtcccgcaagtg
atcgttgtctcccatgacgagcgacttattcagggggctgaacacgagatcgaagtctcg
atcgacgaagacacgaacgccagtagagttgacgtacatcgaggtggacgcatcctaggt
gacgagtaa
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