Halorubrum sp. 2020YC2: KI388_08915
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Entry
KI388_08915 CDS
T08040
Symbol
gcvPA
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase subunit GcvPA
KO
K00282
glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:
1.4.4.2
]
Organism
hazz
Halorubrum sp. 2020YC2
Pathway
hazz00260
Glycine, serine and threonine metabolism
hazz00630
Glyoxylate and dicarboxylate metabolism
hazz00670
One carbon pool by folate
hazz00785
Lipoic acid metabolism
hazz01100
Metabolic pathways
hazz01110
Biosynthesis of secondary metabolites
hazz01200
Carbon metabolism
Module
hazz_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
hazz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
KI388_08915 (gcvPA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
KI388_08915 (gcvPA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
KI388_08915 (gcvPA)
00670 One carbon pool by folate
KI388_08915 (gcvPA)
Enzymes [BR:
hazz01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
KI388_08915 (gcvPA)
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Motif
Pfam:
GDC-P
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
QWC18284
UniProt:
A0A8E8K8N8
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Position
1800783..1802111
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AA seq
442 aa
AA seq
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MSRANGTPYAPHTDEETAAMLAAIGVDDEEALFDIPESVAFDGDFGIEPRTEREIRDECA
RILDRNDDLTEFLGRGHYGHYVPSVVDHLADRAEFLTSYTQYQPEVSQGFLQALFEYQSM
LVELTGLDVANCSMYDAATALGEAATLADRVRSTSGDVVLVPEQLREGKRAVLENYCAGA
DLAVETYPMADGTADVDALAERAGDDVVMVYAESPTVRGCLEERLAAIGETAAETDALFA
LGSDVVALSVLESPEAVGADVVVGEAGALGLPTSYGMGLGIFACRDDFLRQVPGRLVGAS
EDADGDRAYTLTLQTREQHIRKERATSNICTNQAWVALRAAIHAATLGPDGLVDLANDCV
REAEALAARIDDLSGAAAPVHDRHHFREFAVRVDQPAAPVAEDLEAEGFAVHAIDEHLLQ
VCVTDLNAGRTDGLVEALEGVL
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgagccgggcgaacggcaccccgtacgcgccccacaccgacgaggagaccgcggcgatg
ctggccgcgatcggcgtcgacgacgaggaggcgctgttcgacatccccgagtcggtcgcc
ttcgacggcgacttcggtatcgaaccgcgcaccgaacgcgagatccgcgacgagtgcgcc
cggatcttggaccgcaacgacgacctcacggagttcctcggccgggggcactacggccac
tacgtgccgagcgtcgtcgaccacctcgcggaccgcgcggagttcctcacgagctacacc
cagtaccagccggaggtgtcgcaggggttcctccaggccctcttcgagtaccagtcgatg
ctggtcgagctgaccggattagacgtcgcgaactgctcgatgtacgacgccgcgaccgcg
ctcggggaggccgcgacgcttgcggaccgcgtccgctcgacgtccggcgacgtcgtcctc
gtcccggaacagctccgcgaggggaagcgggcggtgctggagaactactgcgccggcgcc
gacctcgccgtcgagacgtacccgatggccgacggcaccgcggacgtcgacgcgctcgcg
gagcgcgccggcgacgacgtggtgatggtgtacgccgagagcccgaccgtccgcggctgc
ctcgaggagcggctcgcggcgatcggtgagacggcggccgagaccgacgcgctgttcgcg
ctcggctcggacgtggtcgcgctgtcggtgctcgaatcgccggaagcggtcggcgccgac
gtcgtggtcggggaggccggcgcgctcggcctgccgaccagctacgggatggggctgggg
atcttcgcctgccgcgacgacttcctccggcaggtccccggccggctcgtcggcgcgagc
gaggacgcggacggcgaccgcgcgtacacgctcacgctccagacccgcgagcagcacatc
cgcaaggagcgggccacctcgaacatctgtacgaaccaggcgtgggtcgcgctccgcgcg
gcgatccacgcggcgacgctcggcccggacggcctcgtcgacctcgcgaacgactgcgtc
cgcgaggcggaggcgctggcggcgcggatcgacgacctctccggcgcggccgcgcccgtc
cacgaccgtcaccacttccgcgagttcgcggtgcgggtcgaccagccggcggcgccggtc
gccgaggacttggaggccgaggggttcgcggtccacgcgatcgacgagcacctgcttcag
gtgtgcgtcaccgacctgaacgccgggcggaccgacggtctcgtcgaggccttggagggg
gtgctgtag
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