Halorubrum sp. 2020YC2: KI388_10290
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Entry
KI388_10290 CDS
T08040
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
hazz
Halorubrum sp. 2020YC2
Pathway
hazz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hazz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
KI388_10290 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hazz03400
]
KI388_10290 (mutS)
DNA repair and recombination proteins [BR:
hazz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
KI388_10290 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
nSTAND_NTPase5
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QWC18527
LinkDB
All DBs
Position
complement(2053955..2056879)
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AA seq
974 aa
AA seq
DB search
MEPADRETATGLPPGIAAAREELTPMLSQYADLCAAHEDALVLFQVGDFYEAFCEAAETV
ARVCEVTLTERSDSTGDYPMAGIPIDNAAPYLESLLDAGYRVALGDQVEDAEQASGLVDR
AVTEVITPGTVVEDDLLESGTTNYVAAVAAEGDGGESDTPGASDRRVGLAAVDVSTGECL
VTAGDRDAVAGELDRIAPAELIAGPDAPAFEPSDAERGWTTHDYDADAFDRRTATERLKP
YLPAPERRFDADAELRAAGAVIAYAEYTQGDDGPLSYVTRIRRYDPRDRLRLDAAAQRSL
ELFENRGLGASDTLFDALDETNCALGRRCLERWLRRPLVDADAIRSRHDAVGELADRSLA
REGVADALSTAYDLERLVSRVSRGRADARDLRSLHRTLAVVPELKATLAGAGGEAGASSE
PGGADEGPALPRTDHLRDLRDRLDELTEVRELIDGAVAVDPPQEITEGGVIREGFDGDLD
DLRATEREGREWVAALEASERERTGIDSLSVGHNQVHGYYIEVTDANVEKVPDDYRRRQT
LKNSERYVTPELKEREEEIVGAAERADALEYDLFVDVRERVAAETERIQGLADALAELDA
LTSLAAVAVARDYVRPELREGPDADVGGAVDPAGGVEIEGGRHPVVERAEESFVPNDADL
PRGSVAVITGPNMSGKSTYMRSVALAVVLAQTGSFVPAQAATLPVFDRLFTRVGASDDIA
GGQSTFMREMSELTEILHDAGADSLVLLDEVGRGTATTDGRAIARAAAEFLHDELGATAL
FATHYHGLTDLADERERVFNLHFTATREDGDVTFLHRVVPGASSSSYGVEVAELAGVPGP
VVDRARDLVAAEEADRRGNAGGAGSEGGTDDGATGGADPDDADRDGDASLREFLAEEASG
ERDEGGPEAGDPSIETPTGSDPEPPANETGEAGAAAGAPSDLTADLRDLDLARMTPIEAL
NALHDLQSRVDDDG
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggaaccggcggaccgagagacggccacggggctgccgcccgggatcgcggccgcccgc
gaggaactcacgccgatgctctcgcagtacgccgacctctgtgccgcccacgaggacgcc
ttggtgttgtttcaggtgggagacttctacgaggcgttctgcgaggcggccgagaccgtc
gcgcgcgtctgcgaggtgacgctgacggagcgctccgactcgaccggcgactacccgatg
gcggggatccccatcgacaacgccgcgccgtacctcgaatcgctgctcgacgcgggctac
cgcgtcgcgctcggcgatcaggtcgaggacgccgagcaggcctccggactcgtcgaccgc
gccgtcaccgaggtgatcacgcccggcaccgtcgtcgaggacgacctcctcgaatcgggg
acgacgaactacgtggcggcggtggcggccgagggcgacggcggcgagagcgacacgccc
ggcgccagcgaccgtcgcgtcggcctcgccgccgtcgacgtctcgacgggagagtgcctc
gtcaccgccggcgaccgggacgcggtcgcgggcgaactcgaccggatcgccccggccgaa
ctcatcgccggccccgacgcccccgcgttcgaaccgagcgacgcggagcgcggctggacg
acccacgactacgacgccgacgccttcgaccgccggaccgcgaccgagcggctgaagccg
tacctcccggcgcccgagcggcggttcgacgccgacgcggagcttcgggcggcgggcgcg
gtgatcgcgtacgccgagtacacgcagggcgacgacggcccgctctcgtacgtcaccaga
atccggcgatacgacccccgcgaccggcttcggctcgacgccgcggcccagcgcagcttg
gagctgttcgagaaccgcgggctgggcgcgagcgacacgctgttcgacgcgctcgacgag
acgaactgcgcgctcggccgccgctgtctggagcgctggctccgccgcccgctcgtcgac
gccgacgcgatccggagccgccacgacgcggtcggggaactggcggaccggagcctcgcc
cgcgagggcgtcgcggacgccctctcgaccgcatacgacctcgaacgactggtgagccgg
gtgtcgcgggggcgggccgacgcccgcgacctgcgctcgcttcaccggacgctcgcggtc
gtccccgagctgaaggcgacgctcgcgggggcagggggagaagcgggtgcgagcagcgag
ccgggtggcgccgatgagggccccgcgctcccccggaccgaccacctccgcgacctccgc
gaccgcctcgacgaactgacagaggtgcgcgagctgatcgacggcgcggtcgcggtcgac
ccgccacaggagatcacggagggcggcgtgatccgcgaggggttcgacggcgacctcgac
gacctgcgcgccaccgagcgcgaggggcgcgagtgggtcgcggccctcgaggcgagcgag
cgcgagcgcaccgggatcgactcgctgtcggtcggtcacaaccaggtccacggctactac
atcgaagtgaccgacgccaacgtcgagaaggtccccgacgactaccggcggcggcagacg
ctgaagaacagcgagcgctacgtcaccccggagctgaaggagcgcgaggaggagatagtc
ggcgccgccgagcgcgcggacgccttggagtacgacctgttcgtcgacgtccgcgagcgc
gtcgcggccgagaccgagcggattcaaggcctcgcggacgcgctcgcggaactcgacgcc
ctgacctcgctcgcggcggtcgcggtcgcgcgcgactacgtccgcccggagctccgggag
ggccccgacgccgacgtcggcggcgcggtcgaccccgccggaggcgtcgagatcgagggc
ggcagacacccggtcgtcgagcgggccgaggagtcgttcgtgccgaacgacgcggacctc
ccgcgcggctcggtcgcggtgatcacgggaccgaacatgagcgggaagtcgacgtacatg
cgctcggtcgccctcgcggtcgtgctcgcgcagacggggtcgttcgtccccgcgcaggcc
gcgacgctccccgtcttcgaccggctgttcacccgcgtcggcgcctccgacgacatcgcg
ggcgggcagtcgacgttcatgcgcgagatgagcgagctgacggagatcctccacgacgcg
ggcgccgactccctcgtcctcttagacgaggtgggccggggaacggccaccaccgacggc
cgcgccatcgcccgcgcggccgccgagttcctccacgacgaactcggcgcgaccgccctc
ttcgcgacccactaccacgggctgacggatctggccgacgagcgcgagcgcgtcttcaac
ctccacttcaccgcgacccgcgaggacggcgacgtgacgttcctccaccgggtcgtcccc
ggcgcctcctcgtcgtcgtacggcgtcgaggtcgcggagctcgccggcgtccccggcccg
gtggtcgaccgcgcccgcgacctcgtcgccgccgaggaggcggacaggcgcgggaacgcg
ggcggtgccggaagcgagggcggaaccgacgacggggcgacgggcggggccgacccggac
gacgccgaccgggacggcgacgcgtcgctgcgggagttcctcgcggaggaggcgtcgggc
gagcgagacgagggcggtccggaggcgggcgacccctccatcgagaccccgaccggaagc
gaccccgagccgccagcgaacgagaccggtgaggcgggtgccgccgccggcgctccgtcc
gacctcaccgcggacctccgcgacctcgacctcgcgcggatgacgcccatcgaggcgctg
aacgccctccacgacctccagtcgcgggtcgacgatgacgggtga
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