Halorubrum sp. 2020YC2: KI388_10305
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Entry
KI388_10305 CDS
T08040
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
hazz
Halorubrum sp. 2020YC2
Pathway
hazz00750
Vitamin B6 metabolism
hazz01100
Metabolic pathways
hazz01240
Biosynthesis of cofactors
Module
hazz_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
hazz00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
KI388_10305 (pdxS)
Enzymes [BR:
hazz01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
KI388_10305 (pdxS)
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Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
IGPS
Dus
NMO
Nif11
PA
Motif
Other DBs
NCBI-ProteinID:
QWC18530
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All DBs
Position
2058585..2059493
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AA seq
302 aa
AA seq
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MAEATDLEELKRGTELVKRGFAQMQKGGVIMDVVNREQARIAEDAGAVAVMVLEHVPADI
RKRGGVARMPDPERVPEVIDEVSIPVMGKSRIGHRKESEILEALGVDMIDESEVLTPADD
EYHTDKRDFTSPFVCGARNLPEALRRIREGAAMIRTKGEAGTGDVNQAVKHQRTIKNQIR
TLTGLNHEEREKWAREHGAPRDLAHETAEAGRLPVVNFAAGGIATPADAALMMYHGCDGI
FVGSGIFGAEDPAAMGTAIVEAVNNWDDPEELARIASGTGKGMKGQSNEDMEEEEKLQSR
GV
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggccaccgatctggaggagctgaagcgggggaccgagctggtcaagcgcggc
ttcgcgcagatgcagaagggcggcgtcatcatggacgtcgttaaccgcgaacaggctcgc
atcgcggaggacgccggcgcggtcgccgtgatggtcctcgaacacgttccggccgacatc
cggaagcgcggcggggtcgcgcggatgcccgaccccgagcgcgtccccgaggtcatcgac
gaggtgtcgatcccggtgatggggaaatcgcggatcggtcaccggaaggagtcggagatc
ttagaggcgctcggcgtcgacatgatcgacgagtcggaggtgctgacgcccgccgacgac
gagtaccacaccgacaagcgcgacttcacctcgccgttcgtctgcggcgcccggaacctc
cccgaggcgctccgccgcatccgcgagggcgcggcgatgatccggacgaagggcgaggcc
ggcacgggcgacgtgaaccaggccgtcaaacaccagcgcaccatcaaaaaccagatccgg
acgctcaccggactcaaccacgaggagcgcgagaagtgggcccgcgagcacggcgccccg
cgcgacctcgcccacgagacggccgaggccggccggctcccggtcgtcaacttcgcggcc
ggcggcatcgcgacgcccgccgacgccgcgctgatgatgtaccacggctgtgacggcatc
ttcgtcggctccggcatcttcggcgcggaggaccccgcggcgatgggcaccgccatcgtc
gaggccgtcaacaactgggacgaccccgaggagctcgcccggatcgcgagcggcaccggc
aaggggatgaagggccagtccaacgaggacatggaagaggaagagaagctccagagccgc
ggcgtttaa
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