Halorubrum sp. 2020YC2: KI388_10995
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Entry
KI388_10995 CDS
T08040
Name
(GenBank) YcaO-like family protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
hazz
Halorubrum sp. 2020YC2
Brite
KEGG Orthology (KO) [BR:
hazz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hazz03009
]
KI388_10995
Ribosome biogenesis [BR:
hazz03009
]
Prokaryotic type
ribosomal protein modification factors
KI388_10995
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
Motif
Other DBs
NCBI-ProteinID:
QWC18653
LinkDB
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Position
2195218..2196909
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AA seq
563 aa
AA seq
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MDIGLVGDGPAVEAAAAALGDVDVNAMPVEAELLDGFDAAVVVDTAGSAAFAAANELLDR
WIAVEVGGLGGVPLDGLDAAVTVFDDACYDCLRARVGSGGAEPADAPTGRRSAVRYAGAV
AGRRAIRLFTGDPVTDTVVEVPGPERTLLPAPGCDCGTDPGDALPREDVERDLDEAIGRA
ERAVDRRVGALSEAGEQESFPLPYYVARIADTTPFSDADAADFGGGAAADWDAAFMKALG
EGLERYAAGVYREAEFTRAPAANVSSPVTPDAFVRPDGAEAYDRGDRLPWVRGERLGTGE
PASLPAEFVGFPPPENRYRPPITTGLGLGSSGPDAALSGLYETIERDATMTSWYSTTEPL
GLDVDHPGFAALEKRARAESLSVTPLLVTTDVDVPVVAVGVSREGDWPRFAAGSGADLDP
AAAARSALAEALQNWTELRSMGREAADEQGAAIGHHADLPAETAAFFDPDATVSAEGLGE
PALSGTEELTAAVDRVEGVGLDPYVARVTTRDLAALGFEAVRVLVPGAQPLFTGDPFFGD
RASEVPRSMGYEPALDRPYHPFP
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggatatcggacttgtcggggacggtcccgcggtcgaggccgccgcggccgcgctcggc
gacgtcgacgtgaacgcgatgcccgtcgaggcggagttactcgacgggttcgacgccgca
gtcgtcgtcgacaccgccggctcggcggcgttcgcggccgcgaacgagctgctcgaccgg
tggatcgcggtcgaggtgggcgggctcggcggcgtcccgctcgacggcctcgacgccgcg
gtgaccgtcttcgacgacgcctgttacgactgccttcgcgcccgcgtcgggagcggcggg
gcggagccggccgacgcgccgaccggccgccggtccgccgtgcgctacgccggcgcggtg
gccggccgccgggcgatccgcctgttcaccggcgacccggtgaccgacaccgtcgtcgag
gtgcccggccccgagcggacgctcctgcccgcccccgggtgcgactgcgggacggacccg
ggcgacgcgctcccgcgcgaggacgtcgagcgggacctcgacgaggcgatcggccgagcg
gagcgcgcggtcgaccgccgggtcggcgccctgagcgaggccggcgagcaggagtcgttc
ccgctgccgtactacgtcgcgcggatcgcggacacgacgcccttctcggacgccgacgcg
gccgacttcggcggcggcgcggccgccgactgggacgccgcgttcatgaaggcgctcggg
gaggggttagagcggtacgcggccggcgtctaccgcgaggccgagttcacgcgcgcgccg
gccgcgaacgtctcgagtcccgtcaccccggacgcgttcgtgcggcccgacggcgccgag
gcgtacgaccgcggcgaccggctcccgtgggtccgcggcgagcgcctcgggacgggcgag
ccggccagcctcccggcggagttcgtcggcttcccgccgccggagaaccggtatcgcccg
ccgatcacgaccgggctgggactcgggagctccgggccggacgccgccttgtccgggctc
tacgagacgatagagcgcgacgcgacgatgaccagttggtactccacgacggagccgctc
gggctcgacgtcgaccacccggggttcgcggcgctggagaagcgggcgcgcgcggagtcg
ctgtcggtgacgccgctgctcgtcacgaccgacgtggacgtgcccgtcgtcgcggtcggc
gtcagccgcgagggcgactggccgcggttcgccgcggggtcgggcgccgacctcgacccg
gccgcggcggcgcggagcgcgctcgcggaggcgctgcaaaactggaccgaactccggtcg
atgggccgggaggcggccgacgagcagggcgcggcgatcggtcaccacgccgacctgccc
gccgagacggcggcgttcttcgacccggacgcgaccgtctccgccgaggggctcggggag
ccggcgctgtcggggacggaggagctgacggccgcggtcgaccgcgtcgagggcgtcggg
ctcgacccctacgtcgcgcgggtgacgacccgcgacctcgcggcgctgggcttcgaggcg
gtccgggtgctggtcccgggcgcgcagccgcttttcaccggcgacccgttcttcggcgac
cgcgcgagcgaggtgccgcggtcgatggggtacgagccggcgctcgaccgcccgtaccac
cccttcccgtga
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